BLASTN 2.2.3 [May-13-2002] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= FJ0AC28ZB07FM1.SCF screened BAC_end (953 letters) Database: Klactis 3X assemblage 11/02 1807 sequences; 10,358,551 total letters Searching....done Score E Sequences producing significant alignments: (bits) Value 3x_Contig716 981 0.0 >3x_Contig716 Length = 3167 Score = 981 bits (495), Expect = 0.0 Identities = 626/659 (94%), Gaps = 8/659 (1%) Strand = Plus / Minus Query: 145 caatgaacttatataggaacaatacaagactcggcacatgaggtccaagtctttctttaa 204 |||| |||||||||| ||||| |||| |||| |||||| ||||| | ||| ||||| Sbjct: 2794 caattaacttatatattaacaaaacaatactctgcacattttttccaattttttttttaa 2735 Query: 205 ccaaacaacaaatcaaaaagaaaaacacaccactgtatatatatatacatatatatatat 264 |||||||||||||||||||||||||||||| ||||||||||||| | | ||||||| Sbjct: 2734 ccaaacaacaaatcaaaaagaaaaacacacgtgtgtatatatatattgttttttatatat 2675 Query: 265 atacacgcatatgtaatgtaatattagtttgtgaatttatttacttcaaaaccaaccatt 324 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 2674 atacacgcatatgtaatgtaatattagtttgtgaatttatttacttcaaaaccaaccatt 2615 Query: 325 ttttcatctctttacagttgacatttgtatctctataaattgtcttttcaaattcgtcca 384 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 2614 ttttcatctctttacagttgacatttgtatctctataaattgtcttttcaaattcgtcca 2555 Query: 385 aagtctgtaagaaaacagcagaatcattagtttggttacagtttgagaacatactaacac 444 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 2554 aagtctgtaagaaaacagcagaatcattagtttggttacagtttgagaacatactaacac 2495 Query: 445 tgatggcgtggttattgatctcttgacctctttctagtagcatatctttcaagacttgtg 504 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 2494 tgatggcgtggttattgatctcttgacctctttctagtagcatatctttcaagacttgtg 2435 Query: 505 atagttctttatccgagaacagtgtggcccacttctcagccagggtgtagaaatgagggc 564 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 2434 atagttctttatccgagaacagtgtggcccacttctcagccagggtgtagaaatgagggc 2375 Query: 565 taattgagtgaagatcgagactagtagcaccagatttaatagcgtttagtactcttggag 624 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 2374 taattgagtgaagatcgagactagtagcaccagatttaatagcgtttagtactcttggag 2315 Query: 625 cgaataaatcaggcgggagcaattcgacaaaaggaagaagtttcttca-ctctagaatct 683 |||||||||||||||||||||||||||||||||||||| ||| ||||| ||||||||||| Sbjct: 2314 cgaataaatcaggcgggagcaattcgacaaaaggaagaggtt-cttcaactctagaatct 2256 Query: 684 tcattagattgcgcaccccctacagcaagaagatggaccatcccaagtggtaactctagg 743 |||||||||||||||||| |||||||||||||||||||||||| |||||||||||||| | Sbjct: 2255 tcattagattgcgcacccactacagcaagaagatggaccatccaaagtggtaactcta-g 2197 Query: 744 ttttgcatttnttcgatattgggcctgccctgggttttccctcccagataacccaaccc 802 |||||||||| ||||||||| || ||| |||||| ||||||| |||||||||||||||| Sbjct: 2196 ttttgcattt-ttcgatatt-ggtctg-cctggg-tttccct-ccagataacccaaccc 2143 Database: Klactis 3X assemblage 11/02 Posted date: Nov 27, 2002 12:23 PM Number of letters in database: 10,358,551 Number of sequences in database: 1807 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 13,300 Number of Sequences: 1807 Number of extensions: 13300 Number of successful extensions: 1957 Number of sequences better than 1.0e-20: 1 length of query: 953 length of database: 10,358,551 effective HSP length: 16 effective length of query: 937 effective length of database: 10,329,639 effective search space: 9678871743 effective search space used: 9678871743 T: 0 A: 40 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 51 (101.6 bits)