BLASTN 2.2.3 [May-13-2002] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= FJ0AC28ZB08FM1.SCF screened BAC_end (930 letters) Database: Klactis 3X assemblage 11/02 1807 sequences; 10,358,551 total letters Searching....done Score E Sequences producing significant alignments: (bits) Value 3x_Contig1640 1136 0.0 >3x_Contig1640 Length = 15521 Score = 1136 bits (573), Expect = 0.0 Identities = 659/680 (96%), Gaps = 6/680 (0%) Strand = Plus / Plus Query: 85 ttgtcaattcgacgttctatgaactaggtccaacgtttcctatctagttgaaggtagccc 144 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 11345 ttgtcaattcgacgttctatgaactaggtccaacgtttcctatctagttgaaggtagccc 11404 Query: 145 tacgtttgaagtcgttattgttttcttgctaaatactatgatcctccctattattgttat 204 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 11405 tacgtttgaagtcgttattgttttcttgctaaatactatgatcctccctattattgttat 11464 Query: 205 ttttattgtt-cattttcactttctttattttcaacactaattcaaggttaaaagacaaa 263 ||||||||| || | ||||||||||||||||||||||||||||||||||||||||||| Sbjct: 11465 ttttattgtaacaatcgcactttctttattttcaacactaattcaaggttaaaagacaaa 11524 Query: 264 cgttctagacgcatataactgcattcagttcaggcattgatctcgagcgttaacaaacta 323 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 11525 cgttctagacgcatataactgcattcagttcaggcattgatctcgagcgttaacaaacta 11584 Query: 324 gttggacaatttcagatgctcataaattgctgaagatccaggaatgttcagcacctcgaa 383 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 11585 gttggacaatttcagatgctcataaattgctgaagatccaggaatgttcagcacctcgaa 11644 Query: 384 aggtagtatgtcagttcaaccaatatcgtaaaatagtgactgaagttttcttcacgtgac 443 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 11645 aggtagtatgtcagttcaaccaatatcgtaaaatagtgactgaagttttcttcacgtgac 11704 Query: 444 ccagatctgtgaacggaggtttcaatattaattataacaaagacgatcctgggttggcag 503 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 11705 ccagatctgtgaacggaggtttcaatattaattataacaaagacgatcctgggttggcag 11764 Query: 504 agaaaaactcggatcccttcactgcaaagtttatacacaaaaccatattccctcatttgt 563 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 11765 agaaaaactcggatcccttcactgcaaagtttatacacaaaaccatattccctcatttgt 11824 Query: 564 cccaaacttcngttcacgatggacaggccatggatactattcatagctgaacctgaatac 623 |||||||||| |||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 11825 cccaaacttcgtttcacgatggacaggccatggatactattcatagctgaacctgaatac 11884 Query: 624 agtttacaggaattatagcttttgcaaaaagagttcaacaccggttaattacacacttga 683 ||||||||||||| |||||||||||||||||||||||| ||||||||||||||||||| Sbjct: 11885 agtttacaggaatataagcttttgcaaaaagagttcaaca-cggttaattacacacttga 11943 Query: 684 acgagaatgttgatggcactggttagggaagcattttttacttttcttggaccacctttc 743 ||||| |||||||||||||||| || |||||||||| | || |||||||||||| | ||| Sbjct: 11944 acgag-atgttgatggcactgg-taaggaagcatttctaac-tttcttggaccagcattc 12000 Query: 744 caaggcaaaagggtccaatt 763 || |||||||||||||||| Sbjct: 12001 gaa-gcaaaagggtccaatt 12019 Database: Klactis 3X assemblage 11/02 Posted date: Nov 27, 2002 12:23 PM Number of letters in database: 10,358,551 Number of sequences in database: 1807 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 7558 Number of Sequences: 1807 Number of extensions: 7558 Number of successful extensions: 49 Number of sequences better than 1.0e-20: 1 length of query: 930 length of database: 10,358,551 effective HSP length: 16 effective length of query: 914 effective length of database: 10,329,639 effective search space: 9441290046 effective search space used: 9441290046 T: 0 A: 40 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 50 (99.6 bits)