BLASTN 2.2.3 [May-13-2002] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= FJ0AC28ZB11FM1.SCF screened BAC_end (902 letters) Database: Klactis 3X assemblage 11/02 1807 sequences; 10,358,551 total letters Searching....done Score E Sequences producing significant alignments: (bits) Value 3x_Contig1475 1342 0.0 >3x_Contig1475 Length = 10676 Score = 1342 bits (677), Expect = 0.0 Identities = 744/764 (97%), Gaps = 2/764 (0%) Strand = Plus / Plus Query: 86 accgcaaaggaagagcactcatcaagagtccaagtcctagtttattcgaacaaaaaattc 145 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 2696 accgcaaaggaagagcactcatcaagagtccaagtcctagtttattcgaacaaaaaattc 2755 Query: 146 ttagagaaaaattgttgcggtttctttttagatacggaaaagaagagatacgtccataca 205 |||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| Sbjct: 2756 ttagagaaaaattgttgcggtttcaaattagatacggaaaagaagagatacgtccataca 2815 Query: 206 gctgttaaaatggttaa-gccaactcactgcccaatattgctaaaccagagtccgtaaca 264 |||||||||| |||||| |||||||||||||||||||||||||||||||||||||||||| Sbjct: 2816 gctgttaaaagggttaaagccaactcactgcccaatattgctaaaccagagtccgtaaca 2875 Query: 265 aaaagcttctccatcgatggtgctggatcgggaaagatatacccacagaaaaatggattc 324 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 2876 aaaagcttctccatcgatggtgctggatcgggaaagatatacccacagaaaaatggattc 2935 Query: 325 agtgtggctttcactactagagagaacagtaacgcatcaggtggaagtagtatggacatg 384 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 2936 agtgtggctttcactactagagagaacagtaacgcatcaggtggaagtagtatggacatg 2995 Query: 385 tctacatcgccacattatactgaagaagctgtgaaagataacacgactcctgctaaccct 444 |||||||||||||||||||||||||||||||||||||||||||||| | ||||||||| | Sbjct: 2996 tctacatcgccacattatactgaagaagctgtgaaagataacacgaatactgctaaccgt 3055 Query: 445 gtatggaattacagtggttcttctgctccccaaccgccactgagttttaatgtcacgcca 504 |||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| Sbjct: 3056 gtatggaattacagtggttcttctgctcnccaaccgccactgagttttaatgtcacgcca 3115 Query: 505 tcattttccgtctcaaccacagttgaaagaagtgagaatgaaaaatctttcagtttgtac 564 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 3116 tcattttccgtctcaaccacagttgaaagaagtgagaatgaaaaatctttcagtttgtac 3175 Query: 565 aataggaccgagatgtcaaatcacggcaacaacagtgctagcacaaatactagcaatggc 624 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 3176 aataggaccgagatgtcaaatcacggcaacaacagtgctagcacaaatactagcaatggc 3235 Query: 625 tctgtttcatctcctttttcatctatccatgttcaaagttcgtcctcttcgataccactg 684 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 3236 tctgtttcatctcctttttcatctatccatgttcaaagttcgtcctcttcgataccactg 3295 Query: 685 tcttccactaacaccaatggcagttctactgatttcagagaaaatagtaacggccttaat 744 |||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||| Sbjct: 3296 tcttccactaacaccaatggcagttctactgattccagagaaaatagtaacggccttaat 3355 Query: 745 gaagcttcctaacttaatgttcagaatctggccactttcaactatttacagaacgcttcg 804 |||||| | |||||||||| ||||||||| ||||||||||||||||||||||||||||| Sbjct: 3356 gaagctcctaaacttaatgtccagaatctgtccactttcaactatttacagaacgcttcg 3415 Query: 805 catgattttc-aattagtatatttgcccaggacagtgttgttat 847 ||||||| || ||| |||||||||||| ||||||||||||||| Sbjct: 3416 catgattctcaaataagtatatttgccagggacagtgttgttat 3459 Database: Klactis 3X assemblage 11/02 Posted date: Nov 27, 2002 12:23 PM Number of letters in database: 10,358,551 Number of sequences in database: 1807 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 5916 Number of Sequences: 1807 Number of extensions: 5916 Number of successful extensions: 33 Number of sequences better than 1.0e-20: 1 length of query: 902 length of database: 10,358,551 effective HSP length: 16 effective length of query: 886 effective length of database: 10,329,639 effective search space: 9152060154 effective search space used: 9152060154 T: 0 A: 40 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 50 (99.6 bits)