BLASTN 2.2.3 [May-13-2002] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= FJ0AC28ZC03FM1.SCF screened BAC_end (912 letters) Database: Klactis 3X assemblage 11/02 1807 sequences; 10,358,551 total letters Searching....done Score E Sequences producing significant alignments: (bits) Value 3x_Contig1394 1017 0.0 >3x_Contig1394 Length = 5721 Score = 1017 bits (513), Expect = 0.0 Identities = 551/561 (98%), Gaps = 2/561 (0%) Strand = Plus / Minus Query: 86 taccgttccaacactgacgaaaagtacttgtgtacttggggtattgacagtgcctacgtc 145 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 856 taccgttccaacactgacgaaaagtacttgtgtacttggggtattgacagtgcctacgtc 797 Query: 146 gttaacgaattgtctgacgtcgtctccatctgtagaaccgattacccaggtactgaaaac 205 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 796 gttaacgaattgtctgacgtcgtctccatctgtagaaccgattacccaggtactgaaaac 737 Query: 206 atggttatcccaactattgtcaacggtggtagcaagttaccattgaccgttgtcgaccag 265 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 736 atggttatcccaactattgtcaacggtggtagcaagttaccattgaccgttgtcgaccag 677 Query: 266 gatacatactacacatggcaaggaatgaagacatcggctcaatactacgttaacaatgct 325 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 676 gatacatactacacatggcaaggaatgaagacatcggctcaatactacgttaacaatgct 617 Query: 326 ggtgtttctaaggaggatggttgtgtctggggtacttctgggtctggtattggtaactgg 385 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 616 ggtgtttctaaggaggatggttgtgtctggggtacttctgggtctggtattggtaactgg 557 Query: 386 gctccattgaacttcggtgctggtgccactggcggtatctcttatctgtctttgattcca 445 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 556 gctccattgaacttcggtgctggtgccactggcggtatctcttatctgtctttgattcca 497 Query: 446 aacccaaacaaccgtgaagcagccaacttcaacgtcaagattgttgcagctgacggtggt 505 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 496 aacccaaacaaccgtgaagcagccaacttcaacgtcaagattgttgcagctgacggtggt 437 Query: 506 agcgtcatcggagaatgtgtttacgaaaacggttcctacaacggtgggagcgatggttgt 565 ||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| Sbjct: 436 agcgtcatcggagaatgtgtttacgaaaacggttcctacaacggtggtagcgatggttgt 377 Query: 566 accgtttcagtgactttttggtgctgcttatttcgttttatacgatttaagacttttttt 625 |||||||||||||| || |||||||||| |||||||||||||||||| | ||| | |||| Sbjct: 376 accgtttcagtgac-ttctggtgctgctaatttcgttttatacgattaatgac-tctttt 319 Query: 626 taaaggcattggcgggatgtt 646 | |||||||||||||||||| Sbjct: 318 cagaggcattggcgggatgtt 298 Database: Klactis 3X assemblage 11/02 Posted date: Nov 27, 2002 12:23 PM Number of letters in database: 10,358,551 Number of sequences in database: 1807 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 11,123 Number of Sequences: 1807 Number of extensions: 11123 Number of successful extensions: 70 Number of sequences better than 1.0e-20: 1 length of query: 912 length of database: 10,358,551 effective HSP length: 16 effective length of query: 896 effective length of database: 10,329,639 effective search space: 9255356544 effective search space used: 9255356544 T: 0 A: 40 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 50 (99.6 bits)