BLASTN 2.2.3 [May-13-2002] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= FJ0AC28ZC03RM1.SCF screened BAC_end (935 letters) Database: Klactis 3X assemblage 11/02 1807 sequences; 10,358,551 total letters Searching....done Score E Sequences producing significant alignments: (bits) Value 3x_Contig1602 1283 0.0 >3x_Contig1602 Length = 12694 Score = 1283 bits (647), Expect = 0.0 Identities = 711/727 (97%), Gaps = 4/727 (0%) Strand = Plus / Minus Query: 46 gctttcactaatgaacaaatggttcgtaacggcgtcggtcaaagaactttccgattcgtg 105 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 6325 gctttcactaatgaacaaatggttcgtaacggcgtcggtcaaagaactttccgattcgtg 6266 Query: 106 gaagaattcacgaaggataccctcctaaaggatgacgagttaagaaacaccgttaagatt 165 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 6265 gaagaattcacgaaggataccctcctaaaggatgacgagttaagaaacaccgttaagatt 6206 Query: 166 catattctaaaaagtgagaagactaccgtggagctaagagatattaatatcgcatttttt 225 |||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 6205 catattctaaaaagtgagaagactaccgtggagctaagagatattaatatcgcacaacag 6146 Query: 226 aatcctaatgcaaaagatgcaggtggcttatttggtatagctatgaaggaattagaaaga 285 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 6145 aatcctaatgcaaaagatgcaggtggcttatttggtatagctatgaaggaattagaaaga 6086 Query: 286 tatggtgcaccatttaatgacaactataacacttctcaagctgctgtcatgttcatggat 345 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 6085 tatggtgcaccatttaatgacaactataacacttctcaagctgctgtcatgttcatggat 6026 Query: 346 agtcattgggacaaaaaactgaaattgattactgcgcatgccgctctcggtggtggtaca 405 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 6025 agtcattgggacaaaaaactgaaattgattactgcgcatgccgctctcggtggtggtaca 5966 Query: 406 aataagatcaaacttgcaattttcggttcccatggtctgtattcttggcctacttgcttt 465 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 5965 aataagatcaaacttgcaattttcggttcccatggtctgtattcttggcctacttgcttt 5906 Query: 466 caagacattgttccttactttttagatgataccagagcaagcacctctgaagtagccaat 525 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 5905 caagacattgttccttactttttagatgataccagagcaagcacctctgaagtagccaat 5846 Query: 526 gattgtaaccagtgcggtacccactgggaatgtctcgcaattacactaggtgcattcatg 585 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 5845 gattgtaaccagtgcggtacccactgggaatgtctcgcaattacactaggtgcattcatg 5786 Query: 586 catgaaataggacacttgctaggctgtccacatcaagaaaattgggtaatgttaagagat 645 |||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| Sbjct: 5785 catgaaataggacacttgctaggctgtccacatcaagaaaatggggtaatgttaagagat 5726 Query: 646 tacatgactttgaacagatcgtttcttaccaaagaagcttacagtttaagaactaattca 705 ||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||| Sbjct: 5725 tacatgactttgaacagatcgttccttaccaaagaagcttacagtttaagaactaattca 5666 Query: 706 tatgggtgcccaatcttcaatattttcctaacttcgaatgtacatggccacagattggga 765 ||| |||||||||||| ||||| | |||||| |||||||||||||| |||||||| ||| Sbjct: 5665 tat-ggtgcccaatctccaata-tatcctaaactcgaatgtacatgg-cacagatt-gga 5610 Query: 766 tattctt 772 ||||||| Sbjct: 5609 tattctt 5603 Database: Klactis 3X assemblage 11/02 Posted date: Nov 27, 2002 12:23 PM Number of letters in database: 10,358,551 Number of sequences in database: 1807 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 6706 Number of Sequences: 1807 Number of extensions: 6706 Number of successful extensions: 44 Number of sequences better than 1.0e-20: 1 length of query: 935 length of database: 10,358,551 effective HSP length: 16 effective length of query: 919 effective length of database: 10,329,639 effective search space: 9492938241 effective search space used: 9492938241 T: 0 A: 40 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 50 (99.6 bits)