BLASTN 2.2.3 [May-13-2002] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= FJ0AC28ZC08FM1.SCF screened BAC_end (940 letters) Database: Klactis 3X assemblage 11/02 1807 sequences; 10,358,551 total letters Searching....done Score E Sequences producing significant alignments: (bits) Value 3x_Contig1628 1356 0.0 >3x_Contig1628 Length = 12927 Score = 1356 bits (684), Expect = 0.0 Identities = 802/833 (96%), Gaps = 10/833 (1%) Strand = Plus / Plus Query: 86 aaccgctggaaacagacagctgaggtccaagatcagattattgcagaaacagctaaggaa 145 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 6999 aaccgctggaaacagacagctgaggtccaagatcagattattgcagaaacagctaaggaa 7058 Query: 146 ttcgaaatctgaaaaaatctcccaacttaataaccaattgggctcctatgatagtacagg 205 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 7059 ttcgaaatctgaaaaaatctcccaacttaataaccaattgggctcctatgatagtacagg 7118 Query: 206 acacaacaaacctgtttatagacccataggacgtgcaaaatacatgaaaagacaaaaaga 265 |||||||||||||| ||||||||||||||||||||||||||||||||||||||||||| Sbjct: 7119 acacaacaaacctgcaaatagacccataggacgtgcaaaatacatgaaaagacaaaaaga 7178 Query: 266 ctttgtatggctaccaactcatttgtggaatgcgaaaagatctcatatgttcaagagatg 325 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 7179 ctttgtatggctaccaactcatttgtggaatgcgaaaagatctcatatgttcaagagatg 7238 Query: 326 ggggttccatctaccgtggtctcccactcagaagaatttcaggctcactcatagattaac 385 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 7239 ggggttccatctaccgtggtctcccactcagaagaatttcaggctcactcatagattaac 7298 Query: 386 agccaatgttgcaagttctaatggagcaatggcttgtgacactagctatatgggtgatat 445 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 7299 agccaatgttgcaagttctaatggagcaatggcttgtgacactagctatatgggtgatat 7358 Query: 446 gatagtttcctgttctgatcacgagaaattgaaggatgtaatcaaacaactgactaatgg 505 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 7359 gatagtttcctgttctgatcacgagaaattgaaggatgtaatcaaacaactgactaatgg 7418 Query: 506 acgggcttgtttaccaaagtaccttaaaaggcaactgtttaagggtttattgtattttgg 565 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 7419 acgggcttgtttaccaaagtaccttaaaaggcaactgtttaagggtttattgtattttgg 7478 Query: 566 gaccgaatgtgttggcccatgtaatgtcctttggtttaatccaaaatgtgtactaatccg 625 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 7479 gaccgaatgtgttggcccatgtaatgtcctttggtttaatccaaaatgtgtactaatccg 7538 Query: 626 tctt-acccctca-tatatcttcaggttttcagtaaactcgtttcctgtttgaatctgaa 683 |||| |||||||| |||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 7539 tcttcacccctcaatatatcttcaggttttcagtaaactcgtttcctgtttgaatctgaa 7598 Query: 684 agatttttctgttcaagattgtcaattctcccttggttccattactatatctggtgggaa 743 ||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 7599 agaattttctgttcaagattgtcaattctcccttggttccattactatatctggtgggaa 7658 Query: 744 atctctgtatgctctgtcgcagattttgagaattacaagcgattccccattttacaagca 803 |||||||||||||||||||||||| |||||| ||||||||||||| ||| ||||||||| Sbjct: 7659 atctctgtatgctctgtcgcagatattgagatctacaagcgattccacatcttacaagca 7718 Query: 804 atttcaagaaaatatcacgtattaaagaacctcaaccgtttttgccagaaaaaaaaaggt 863 ||| || ||||||||||||||| | ||| ||| |||||||| ||||||||| | || || Sbjct: 7719 attcca-gaaaatatcacgtataacaga--ctccaccgtttt-gccagaaaagacaatgt 7774 Query: 864 ttgccttttgaaaccatggaacccccaatatttttgtaaaatccaaaaccgtg 916 |||||||| ||| | ||||| ||| | |||||||| ||||||||||||||| Sbjct: 7775 ttgccttt-gaagcaatggacccc---agatttttgtcaaatccaaaaccgtg 7823 Database: Klactis 3X assemblage 11/02 Posted date: Nov 27, 2002 12:23 PM Number of letters in database: 10,358,551 Number of sequences in database: 1807 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 7089 Number of Sequences: 1807 Number of extensions: 7089 Number of successful extensions: 56 Number of sequences better than 1.0e-20: 1 length of query: 940 length of database: 10,358,551 effective HSP length: 16 effective length of query: 924 effective length of database: 10,329,639 effective search space: 9544586436 effective search space used: 9544586436 T: 0 A: 40 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 50 (99.6 bits)