BLASTN 2.2.3 [May-13-2002] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= FJ0AC28ZD09FM1.SCF screened BAC_end (944 letters) Database: Klactis 3X assemblage 11/02 1807 sequences; 10,358,551 total letters Searching....done Score E Sequences producing significant alignments: (bits) Value 3x_Contig1673 1229 0.0 >3x_Contig1673 Length = 13723 Score = 1229 bits (620), Expect = 0.0 Identities = 671/680 (98%), Gaps = 6/680 (0%) Strand = Plus / Minus Query: 102 attttacagaattacacagtccgcggcctcattgcaaaacttaccagaaactaccccaga 161 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 12143 attttacagaattacacagtccgcggcctcattgcaaaacttaccagaaactaccccaga 12084 Query: 162 tgaatcactttttaaattgcaattgagaaggtaccaaaagcaaagtttgtcatggatgct 221 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 12083 tgaatcactttttaaattgcaattgagaaggtaccaaaagcaaagtttgtcatggatgct 12024 Query: 222 caaaagagaatacgagtatagtcatttatcagagaaagccgcagaagtgtctattgatgg 281 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 12023 caaaagagaatacgagtatagtcatttatcagagaaagccgcagaagtgtctattgatgg 11964 Query: 282 gaatagtatgaatccactatggaagaaattccgctggccatctaattcaaaacaagggac 341 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 11963 gaatagtatgaatccactatggaagaaattccgctggccatctaattcaaaacaagggac 11904 Query: 342 tccaaaccacgaagatgattgcttcttttatgctaatttatacactggtgagttttctat 401 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 11903 tccaaaccacgaagatgattgcttcttttatgctaatttatacactggtgagttttctat 11844 Query: 402 cgagaagccggtcattaagacgataatcaatggaggtattttggcggatgagatgggtct 461 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 11843 cgagaagccggtcattaagacgataatcaatggaggtattttggcggatgagatgggtct 11784 Query: 462 agggaaaacaatatcagctttagcattgatttgtactgctagctatgatgaggctcatga 521 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 11783 agggaaaacaatatcagctttagcattgatttgtactgctagctatgatgaggctcatga 11724 Query: 522 aaagaaaattgagtcaaccaaaaagccttctatgaaggagatgtcttctcaagtggattc 581 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 11723 aaagaaaattgagtcaaccaaaaagccttctatgaaggagatgtcttctcaagtggattc 11664 Query: 582 ctctccattacgccattctc-acataagcatgacacttatgctt-caggacgacgttgat 639 |||||||||||||||||||| ||||||||||||||||||||||| ||||||||||||||| Sbjct: 11663 ctctccattacgccattctcaacataagcatgacacttatgcttacaggacgacgttgat 11604 Query: 640 agtagtgccgatgtccttattgaatcagtggcattcagaattcgaaaaggccaacaaggt 699 ||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||| Sbjct: 11603 agtagtgccgatgtccttattgaatcagtggcaatcagaattcgaaaaggccaacaagg- 11545 Query: 700 acctcaaaaaacgttgtgaaatttattacgggaattattttaaaagatttaaggggcgta 759 ||||||||||||||||||||||||||||||||||| || || |||||||||| ||||||| Sbjct: 11544 acctcaaaaaacgttgtgaaatttattacgggaataatatt-aaagatttaa-gggcgta 11487 Query: 760 tgtgctttggccccaacgct 779 ||||| |||||||||||||| Sbjct: 11486 tgtgc-ttggccccaacgct 11468 Database: Klactis 3X assemblage 11/02 Posted date: Nov 27, 2002 12:23 PM Number of letters in database: 10,358,551 Number of sequences in database: 1807 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 6309 Number of Sequences: 1807 Number of extensions: 6309 Number of successful extensions: 50 Number of sequences better than 1.0e-20: 1 length of query: 944 length of database: 10,358,551 effective HSP length: 16 effective length of query: 928 effective length of database: 10,329,639 effective search space: 9585904992 effective search space used: 9585904992 T: 0 A: 40 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 50 (99.6 bits)