BLASTN 2.2.3 [May-13-2002] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= FJ0AC28ZE07RM1.SCF screened BAC_end (925 letters) Database: Klactis 3X assemblage 11/02 1807 sequences; 10,358,551 total letters Searching....done Score E Sequences producing significant alignments: (bits) Value 3x_Contig1509 1154 0.0 >3x_Contig1509 Length = 8584 Score = 1154 bits (582), Expect = 0.0 Identities = 635/650 (97%), Gaps = 2/650 (0%) Strand = Plus / Minus Query: 50 aatcttagagtcttcagctttaacaccaacggcttcaagaacgttcttgatttcagtagc 109 |||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||| Sbjct: 6734 aatcttagagtcttcagcttcaacaccaacggcttcaagaacgttcttgatttcagtagc 6675 Query: 110 ggatggagattcaacaccaccttgagcgatcaacaagtaagctgccaagtacttcatttc 169 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 6674 ggatggagattcaacaccaccttgagcgatcaacaagtaagctgccaagtacttcatttc 6615 Query: 170 tggtccggttttattttgaaataatcgatttaagcaagaagcagactattttttggtcta 229 |||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| Sbjct: 6614 tggtccggttttattttgaaataatcgatttaagcaagaagcagactattccttggtcta 6555 Query: 230 ttaggaaatatgataataaataaataacaaaccagaaagaacaagaaacaaagagaggtt 289 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 6554 ttaggaaatatgataataaataaataacaaaccagaaagaacaagaaacaaagagaggtt 6495 Query: 290 taagtatataataaatattcgaattatatagccttgtattaagttgaacaagttttaaac 349 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 6494 taagtatataataaatattcgaattatatagccttgtattaagttgaacaagttttaaac 6435 Query: 350 tcttctcatctctatttttttttcttcaatttcatccaagaaactttgcatcatcgtgaa 409 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 6434 tcttctcatctctatttttttttcttcaatttcatccaagaaactttgcatcatcgtgaa 6375 Query: 410 aaatttcagactattctttgtaatcatgtacgaccactcgctaattgttggttgtctcat 469 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 6374 aaatttcagactattctttgtaatcatgtacgaccactcgctaattgttggttgtctcat 6315 Query: 470 gaaaaaagttactaatcattatacacggaaatacaaccacaacgatatttgaatctaaga 529 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 6314 gaaaaaagttactaatcattatacacggaaatacaaccacaacgatatttgaatctaaga 6255 Query: 530 gtgccacgtcatatttacatccgggtaacattcgtaaattctgtttcgcattctcttttc 589 |||||||||||||| |||||||||||||||||||||||||||||||||||||||| |||| Sbjct: 6254 gtgccacgtcatatatacatccgggtaacattcgtaaattctgtttcgcattctc-tttc 6196 Query: 590 tttttggactcttggatcgcacgcagtttccatttagaaatatcccaatttatttccgca 649 ||||||||||||||||||||||||||||||||||||| || ||| ||| | ||||||| Sbjct: 6195 tttttggactcttggatcgcacgcagtttccatttag-aagatcacaaatatattccgca 6137 Query: 650 gcagtgatacttgcatatttaatacctacttgatgcattcgtgaaaagga 699 |||||||||||||||||||| |||| |||||||||||| ||||||||||| Sbjct: 6136 gcagtgatacttgcatatttcatacgtacttgatgcatacgtgaaaagga 6087 Database: Klactis 3X assemblage 11/02 Posted date: Nov 27, 2002 12:23 PM Number of letters in database: 10,358,551 Number of sequences in database: 1807 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 13,286 Number of Sequences: 1807 Number of extensions: 13286 Number of successful extensions: 144 Number of sequences better than 1.0e-20: 1 length of query: 925 length of database: 10,358,551 effective HSP length: 16 effective length of query: 909 effective length of database: 10,329,639 effective search space: 9389641851 effective search space used: 9389641851 T: 0 A: 40 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 50 (99.6 bits)