BLASTN 2.2.3 [May-13-2002] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= FJ0AC28ZF03RM1.SCF screened BAC_end (929 letters) Database: Klactis 3X assemblage 11/02 1807 sequences; 10,358,551 total letters Searching....done Score E Sequences producing significant alignments: (bits) Value 3x_Contig1698 1227 0.0 >3x_Contig1698 Length = 21001 Score = 1227 bits (619), Expect = 0.0 Identities = 707/731 (96%), Gaps = 4/731 (0%) Strand = Plus / Minus Query: 47 ttcttatacatcacaaaataccttgctgaaaaaccagtgttatctgagagctttgcaaag 106 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 12241 ttcttatacatcacaaaataccttgctgaaaaaccagtgttatctgagagctttgcaaag 12182 Query: 107 attcttgaaacaactaagaagtttatgactaaatcatctgcagatttgtggaaattagtg 166 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 12181 attcttgaaacaactaagaagtttatgactaaatcatctgcagatttgtggaaattagtg 12122 Query: 167 aagccatccattcttaatgcccagctagaggtagtttcttcaagcatctgttttaagaat 226 |||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| Sbjct: 12121 aagccatccattcttaatgcccagctagaggtagtttcttcaagcatctgggttaagaat 12062 Query: 227 gatgttttaatggagtactataatgtgctgttgctgaaagccgataaatcatctgtcaac 286 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 12061 gatgttttaatggagtactataatgtgctgttgctgaaagccgataaatcatctgtcaac 12002 Query: 287 tcgaatcagatattacagctacttttaaacaacgattctcttgtttatttgaatgaaaag 346 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 12001 tcgaatcagatattacagctacttttaaacaacgattctcttgtttatttgaatgaaaag 11942 Query: 347 ggctccaaatatagtaaacttttaactacttcagctctctatcaattattcttcatggac 406 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 11941 ggctccaaatatagtaaacttttaactacttcagctctctatcaattattcttcatggac 11882 Query: 407 gttaccgaaaattcaaacattgccctacaaaataaacttttagaattctacagcggatcg 466 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 11881 gttaccgaaaattcaaacattgccctacaaaataaacttttagaattctacagcggatcg 11822 Query: 467 ataactacatcagacattcttttgctatccatgttggacaaaatggaatccattgtcgga 526 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 11821 ataactacatcagacattcttttgctatccatgttggacaaaatggaatccattgtcgga 11762 Query: 527 caatcatggactaacgagatagtgagttgggaatttgttgattctcttcgcgagattg-a 585 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | Sbjct: 11761 caatcatggactaacgagatagtgagttgggaatttgttgattctcttcgcgagattgaa 11702 Query: 586 attgaatt-atttggccttttaagttgatatcaaaggag-aagaaggtttggttgttaca 643 |||||||| ||| ||||||| ||||||||| |||||||| ||||||| |||||||||||| Sbjct: 11701 attgaattaattgggcctttaaagttgataacaaaggagaaagaagggttggttgttaca 11642 Query: 644 attagtatgaatgatttattaaaccttttgaataatttttcttcgcattgcccaaggccc 703 ||||||||||||||| ||| |||| ||||||||||||| |||||||| ||||||||||| Sbjct: 11641 attagtatgaatgatatatcaaacactttgaataattttccttcgcatcgcccaaggccc 11582 Query: 704 gattcgtttccaactggttcaaccggagaaaaattggacaaactccaaaacctgtacagg 763 |||||||| | ||||||| |||| | |||||||| | ||||||||||||||||||||| Sbjct: 11581 gattcgttccaaactggtacaacagaagaaaaatggaacaaactccaaaacctgtaca-a 11523 Query: 764 ggcggaagttg 774 ||||||||||| Sbjct: 11522 ggcggaagttg 11512 Database: Klactis 3X assemblage 11/02 Posted date: Nov 27, 2002 12:23 PM Number of letters in database: 10,358,551 Number of sequences in database: 1807 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 8136 Number of Sequences: 1807 Number of extensions: 8136 Number of successful extensions: 54 Number of sequences better than 1.0e-20: 1 length of query: 929 length of database: 10,358,551 effective HSP length: 16 effective length of query: 913 effective length of database: 10,329,639 effective search space: 9430960407 effective search space used: 9430960407 T: 0 A: 40 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 50 (99.6 bits)