BLASTN 2.2.3 [May-13-2002] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= FJ0AC28ZF06RM1.SCF screened BAC_end (953 letters) Database: Klactis 3X assemblage 11/02 1807 sequences; 10,358,551 total letters Searching....done Score E Sequences producing significant alignments: (bits) Value 3x_Contig1049 1009 0.0 >3x_Contig1049 Length = 4107 Score = 1009 bits (509), Expect = 0.0 Identities = 564/580 (97%), Gaps = 3/580 (0%) Strand = Plus / Plus Query: 77 ttgggattgaaagggcaccctccgaacatatatataggatccttcttcacctttgccaat 136 |||||||||||||||||| |||||||||||||||||||||||||||||||||||||||| Sbjct: 17 ttgggattgaaagggcac--tccgaacatatatataggatccttcttcacctttgccaat 74 Query: 137 agtttttctctttgttttctcttctttaaattctcattggttgcttcatctttctcagga 196 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 75 agtttttctctttgttttctcttctttaaattctcattggttgcttcatctttctcagga 134 Query: 197 atgatttcttcgtcattggcaatatgcaacggctcttcagtctccgaaacagagtgcttg 256 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 135 atgatttcttcgtcattggcaatatgcaacggctcttcagtctccgaaacagagtgcttg 194 Query: 257 tcattaatggagatatacctgtttcctgtataagtttcgtcccagtaatccttaccatat 316 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 195 tcattaatggagatatacctgtttcctgtataagtttcgtcccagtaatccttaccatat 254 Query: 317 gatcctcgaagtgtgttcttattgtgataattcgctctgctcaactgatggtaaccttct 376 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 255 gatcctcgaagtgtgttcttattgtgataattcgctctgctcaactgatggtaaccttct 314 Query: 377 tcaaaactagcttgcaactgctctaatagagaatcataggttgcaagattcttaacaatg 436 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 315 tcaaaactagcttgcaactgctctaatagagaatcataggttgcaagattcttaacaatg 374 Query: 437 agttgatatatgtcatcctccgtcatcattggtttcctagcgtctattaatatccaaatc 496 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 375 agttgatatatgtcatcctccgtcatcattggtttcctagcgtctattaatatccaaatc 434 Query: 497 gtggcagtttcttctcatattacgtatattattcagtcattaacgtttttaaccaaactt 556 |||||||||||||||||||||||||||||||||||||||| |||||||| |||||||||| Sbjct: 435 gtggcagtttcttctcatattacgtatattattcagtcataaacgttttaaaccaaactt 494 Query: 557 ttgaagttgtctgaaatttttgtaacttaattatagtcaatgattttatttaacgatttc 616 ||||||||||||||||| ||||||||||||| |||||||||||||| | ||||| ||| Sbjct: 495 ttgaagttgtctgaaatatttgtaacttaatcatagtcaatgatttatataaacgaattc 554 Query: 617 -caggtgaaagaaaagtagcaattttgcgacaaaccagct 655 |||||||||||| ||||||| |||||||||||||||| Sbjct: 555 gaaggtgaaagaaagttagcaatattgcgacaaaccagct 594 Database: Klactis 3X assemblage 11/02 Posted date: Nov 27, 2002 12:23 PM Number of letters in database: 10,358,551 Number of sequences in database: 1807 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 14,497 Number of Sequences: 1807 Number of extensions: 14497 Number of successful extensions: 101 Number of sequences better than 1.0e-20: 1 length of query: 953 length of database: 10,358,551 effective HSP length: 16 effective length of query: 937 effective length of database: 10,329,639 effective search space: 9678871743 effective search space used: 9678871743 T: 0 A: 40 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 51 (101.6 bits)