BLASTN 2.2.3 [May-13-2002] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= FJ0AC28ZF09FM1.SCF screened BAC_end (941 letters) Database: Klactis 3X assemblage 11/02 1807 sequences; 10,358,551 total letters Searching....done Score E Sequences producing significant alignments: (bits) Value 3x_Contig1794 1338 0.0 >3x_Contig1794 Length = 36744 Score = 1338 bits (675), Expect = 0.0 Identities = 737/755 (97%), Gaps = 2/755 (0%) Strand = Plus / Minus Query: 88 agataagagggagcaagcttggttaaaggaacacgaaaaaaggaaaaagaaactgaagaa 147 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 29671 agataagagggagcaagcttggttaaaggaacacgaaaaaaggaaaaagaaactgaagaa 29612 Query: 148 aagccattcataaacatgtcaatgtacgaattgaatatatcatttattcatctaatatac 207 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 29611 aagccattcataaacatgtcaatgtacgaattgaatatatcatttattcatctaatatac 29552 Query: 208 aattaattaatgcattagttgaaatcatagatccaaatgaaatcaacattttgaagtttg 267 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 29551 aattaattaatgcattagttgaaatcatagatccaaatgaaatcaacattttgaagtttg 29492 Query: 268 tgtactattataaaattgctttacaatatcaactctataaatccataacatactgcaaag 327 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 29491 tgtactattataaaattgctttacaatatcaactctataaatccataacatactgcaaag 29432 Query: 328 attatgataatgaagatcacaacaccagtaatataatgccaagtaggtgcaaacgtgaat 387 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 29431 attatgataatgaagatcacaacaccagtaatataatgccaagtaggtgcaaacgtgaat 29372 Query: 388 cttgaaaacattaataacaaagaccatgcaccgagaattaaggatatggataatgatatg 447 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 29371 cttgaaaacattaataacaaagaccatgcaccgagaattaaggatatggataatgatatg 29312 Query: 448 aatatcatcgtcaaaatagaagtttcgttttctagttgtgtatcatcgttgagtgatttg 507 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 29311 aatatcatcgtcaaaatagaagtttcgttttctagttgtgtatcatcgttgagtgatttg 29252 Query: 508 aacaaagatgtcatgataccaatggttacgcctgtagtcaaacaggatattagcaatgaa 567 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 29251 aacaaagatgtcatgataccaatggttacgcctgtagtcaaacaggatattagcaatgaa 29192 Query: 568 gaaacatagaagaaagatatcacctggtcatgctcgaactcatatattgattctgaattt 627 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 29191 gaaacatagaagaaagatatcacctggtcatgctcgaactcatatattgattctgaattt 29132 Query: 628 tgttcttcgagttcccaaaacttattcacgttgtttcttttcggagaaagagaaattagt 687 ||||||||||||||||||||||||||||||| |||||||| || |||| |||| | ||| Sbjct: 29131 tgttcttcgagttcccaaaacttattcacgtcgtttctttccgaagaagaagaagtaagt 29072 Query: 688 attggagtgtcagtgtctattgagttgtaggacttaactgcatctc-taattaagatttc 746 || | ||||||||||||||||||||||||||||||| ||||||||| |||| |||||||| Sbjct: 29071 atggaagtgtcagtgtctattgagttgtaggacttacctgcatctcttaataaagatttc 29012 Query: 747 ctagcttggacgtcgtcaattataccgaatgcaatttggaacttcgattagagatgatta 806 |||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| Sbjct: 29011 ctagcttggacgtcgtcaattataccgaatgcaatttggaacttcgataagagatgatag 28952 Query: 807 atggcatttttgaatgatggggttaaatctgatga 841 |||||| || |||||||| |||||||||||||||| Sbjct: 28951 atggcaattatgaatgat-gggttaaatctgatga 28918 Database: Klactis 3X assemblage 11/02 Posted date: Nov 27, 2002 12:23 PM Number of letters in database: 10,358,551 Number of sequences in database: 1807 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 8600 Number of Sequences: 1807 Number of extensions: 8600 Number of successful extensions: 66 Number of sequences better than 1.0e-20: 1 length of query: 941 length of database: 10,358,551 effective HSP length: 16 effective length of query: 925 effective length of database: 10,329,639 effective search space: 9554916075 effective search space used: 9554916075 T: 0 A: 40 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 50 (99.6 bits)