BLASTN 2.2.3 [May-13-2002] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= FJ0AC28ZG01FM1.SCF screened BAC_end (928 letters) Database: Klactis 3X assemblage 11/02 1807 sequences; 10,358,551 total letters Searching....done Score E Sequences producing significant alignments: (bits) Value 3x_Contig1666 872 0.0 >3x_Contig1666 Length = 16162 Score = 872 bits (440), Expect = 0.0 Identities = 463/468 (98%), Gaps = 2/468 (0%) Strand = Plus / Plus Query: 82 gcttcttacaataatcgcatgccttgacacctcgcgtacctcttttcgctggtgttttct 141 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1999 gcttcttacaataatcgcatgccttgacacctcgcgtacctcttttcgctggtgttttct 2058 Query: 142 tagctatcttattttgtccagtgctcattaatgaagagtgctatgattccttgtaatatt 201 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 2059 tagctatcttattttgtccagtgctcattaatgaagagtgctatgattccttgtaatatt 2118 Query: 202 atagtaagaaaaagcactgtcaaggacaaaaaaaatcttcgtttttcaaggaggaactgt 261 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 2119 atagtaagaaaaagcactgtcaaggacaaaaaaaatcttcgtttttcaaggaggaactgt 2178 Query: 262 aatatctaccaatattcaactcctacgctctctcctaccatgtaacgactactggagatg 321 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 2179 aatatctaccaatattcaactcctacgctctctcctaccatgtaacgactactggagatg 2238 Query: 322 tgctccgtatacctttgtatatgtaaatctggctaatcgaactaatttcaagatgcattt 381 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 2239 tgctccgtatacctttgtatatgtaaatctggctaatcgaactaatttcaagatgcattt 2298 Query: 382 gtgtttctttttgacaaatttcacggtataaatggataaagaggttacaatcacaggaaa 441 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 2299 gtgtttctttttgacaaatttcacggtataaatggataaagaggttacaatcacaggaaa 2358 Query: 442 aaaacgatatacatcacgaaaataggtggtagactactttaactggtctcaatcattgca 501 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 2359 aaaacgatatacatcacgaaaataggtggtagactactttaactggtctcaatcattgca 2418 Query: 502 taatattctttcagcttggcacttctggtcgccctcaaaatttggcat 549 |||||||| ||||||||| |||| ||||||| |||||||| ||||||| Sbjct: 2419 taatattc-ttcagcttgacactactggtcg-cctcaaaaattggcat 2464 Database: Klactis 3X assemblage 11/02 Posted date: Nov 27, 2002 12:23 PM Number of letters in database: 10,358,551 Number of sequences in database: 1807 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 7187 Number of Sequences: 1807 Number of extensions: 7187 Number of successful extensions: 62 Number of sequences better than 1.0e-20: 1 length of query: 928 length of database: 10,358,551 effective HSP length: 16 effective length of query: 912 effective length of database: 10,329,639 effective search space: 9420630768 effective search space used: 9420630768 T: 0 A: 40 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 50 (99.6 bits)