BLASTN 2.2.3 [May-13-2002] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= FJ0AC28ZG07FM1.SCF screened BAC_end (919 letters) Database: Klactis 3X assemblage 11/02 1807 sequences; 10,358,551 total letters Searching....done Score E Sequences producing significant alignments: (bits) Value 3x_Contig1771 1160 0.0 >3x_Contig1771 Length = 25932 Score = 1160 bits (585), Expect = 0.0 Identities = 709/741 (95%), Gaps = 7/741 (0%) Strand = Plus / Minus Query: 86 agttcatatcatgttaaacgttcttgatggaggtcacctgactatattggcactatacac 145 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 18222 agttcatatcatgttaaacgttcttgatggaggtcacctgactatattggcactatacac 18163 Query: 146 gttatataaggaatggaatgaacacagcaccatgccaatggactcccagtatcatgactt 205 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 18162 gttatataaggaatggaatgaacacagcaccatgccaatggactcccagtatcatgactt 18103 Query: 206 cttgatttcaactgtatcacctcttagttctcttgcctttctagcacttgaataagctcc 265 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 18102 cttgatttcaactgtatcacctcttagttctcttgcctttctagcacttgaataagctcc 18043 Query: 266 ttgtttggatgtaccgtgtaatccacttctgtagacagccgaaacaatgttgatcccgca 325 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 18042 ttgtttggatgtaccgtgtaatccacttctgtagacagccgaaacaatgttgatcccgca 17983 Query: 326 taccactccgtcaataattggcacttcatagccattctgctgtaaagcgtttgcaacagc 385 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 17982 taccactccgtcaataattggcacttcatagccattctgctgtaaagcgtttgcaacagc 17923 Query: 386 atttttcaagtcgctcatccctgcacagcccaagatgatggtgtctgcgtgatattcttc 445 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 17922 atttttcaagtcgctcatccctgcacagcccaagatgatggtgtctgcgtgatattcttc 17863 Query: 446 tactaaggtcaaggcagttttagacattgttttatgaagctcagcttctttcactttgac 505 |||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| Sbjct: 17862 tactaaggtcaaggcagttttagacattgttttatgaagctcagcttcttccactttgac 17803 Query: 506 caaatccgatacgggtttgataccagaacttaacaatccaacgcaaaatgtggacatgcc 565 |||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 17802 caaatccgatacggttttgataccagaacttaacaatccaacgcaaaatgtggacatgcc 17743 Query: 566 aagacctgctatggtttccctcatcttcttaactgagcctttgtaaaattgatgcaagga 625 ||||||||||||||||| ||||||| ||||||||||||| |||| ||||||||||||| | Sbjct: 17742 aagacctgctatggttt-cctcatc-tcttaactgagcc-ttgt-aaattgatgcaagaa 17687 Query: 626 taccggaattttgatccaatgatcctggatgagtacaacggtgctttcacgatacccatg 685 |||| |||||||||||||||||||||||||||||||| | ||||| ||||||||||||| Sbjct: 17686 tacc-gaattttgatccaatgatcctggatgagtacacggctgcttccacgatacccatg 17628 Query: 686 cccacaacatcctcaaattttcccctgatgaatttaatcaatggaaggtccgttaaaaca 745 | ||||||||| ||||||| | ||||||| |||| ||||||||| ||| || ||||||| Sbjct: 17627 cacacaacatcatcaaattcttccctgatagattttatcaatggatggt-cgctaaaaca 17569 Query: 746 tccagcaagttccccaatcgacttgggttattacatcggaagcattttccataacggtaa 805 |||| |||| | | |||||||||||| ||||||||||| |||||| ||||||||||| || Sbjct: 17568 tccaacaag-tacacaatcgacttggtttattacatcgtaagcatcttccataacggcaa 17510 Query: 806 tggcaaattgaataccatcga 826 | ||| ||||||||||||||| Sbjct: 17509 ttgcagattgaataccatcga 17489 Database: Klactis 3X assemblage 11/02 Posted date: Nov 27, 2002 12:23 PM Number of letters in database: 10,358,551 Number of sequences in database: 1807 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 5429 Number of Sequences: 1807 Number of extensions: 5429 Number of successful extensions: 38 Number of sequences better than 1.0e-20: 1 length of query: 919 length of database: 10,358,551 effective HSP length: 16 effective length of query: 903 effective length of database: 10,329,639 effective search space: 9327664017 effective search space used: 9327664017 T: 0 A: 40 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 50 (99.6 bits)