BLASTN 2.2.3 [May-13-2002] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= FJ0AC28ZG09FM1.SCF screened BAC_end (896 letters) Database: Klactis 3X assemblage 11/02 1807 sequences; 10,358,551 total letters Searching....done Score E Sequences producing significant alignments: (bits) Value 3x_Contig1265 1106 0.0 >3x_Contig1265 Length = 8324 Score = 1106 bits (558), Expect = 0.0 Identities = 633/653 (96%), Gaps = 4/653 (0%) Strand = Plus / Minus Query: 86 tcaatggacgtattgcaaaattatctgatccggagtttgtagctagcttaggtccccagg 145 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 4862 tcaatggacgtattgcaaaattatctgatccggagtttgtagctagcttaggtccccagg 4803 Query: 146 atttggtcaccattgcgaagcacgactctcaaaagaaaaccgtcggctcctttttttatg 205 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 4802 atttggtcaccattgcgaagcacgactctcaaaagaaaaccgtcggctcctttttttatg 4743 Query: 206 tggctggactggacacttcagatccagctagtattgcagtgtggttgaaacaattgatgg 265 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 4742 tggctggactggacacttcagatccagctagtattgcagtgtggttgaaacaattgatgg 4683 Query: 266 aatgcattcaggaaaaaccacagttatggtttggcaagaatgttaaattcactctcgaat 325 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 4682 aatgcattcaggaaaaaccacagttatggtttggcaagaatgttaaattcactctcgaat 4623 Query: 326 ggatctcgttcactacttggaatatcttcaaacaatgtgatatgactattaagatgtatc 385 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 4622 ggatctcgttcactacttggaatatcttcaaacaatgtgatatgactattaagatgtatc 4563 Query: 386 tgccaggtacctttgaaatagattttgttgacaaaaatcgtaataagctacaattcgact 445 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 4562 tgccaggtacctttgaaatagattttgttgacaaaaatcgtaataagctacaattcgact 4503 Query: 446 cagatgaagatactgatatggcgtgggctgaagccttcatcagtgggaaaatgagagaca 505 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 4502 cagatgaagatactgatatggcgtgggctgaagccttcatcagtgggaaaatgagagaca 4443 Query: 506 taatgtgtatggtagagaatagagatgatggagaagttatcaatgtttgtggagactaga 565 ||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| Sbjct: 4442 taatgtgtatggtagagaatagagatgatggagaagttatcaatg-ttgtggagactaga 4384 Query: 566 atttancaccccttgatgactggtcaattggattctgtagatgaaatgttctttaaataa 625 ||||| |||||||||||||||||||||||||||||||||||||||||||||| |||| | Sbjct: 4383 atttacaaccccttgatgactggtcaattggattctgtagatgaaatgttcttcaaatta 4324 Query: 626 tt-ccgcttttctttcctcgtggcatttgagtttgtttgcccgtgtatataccgtaatat 684 || ||||| ||||| |||||||||| ||||| ||| |||||||||||||||| ||||||| Sbjct: 4323 ttcccgctattcttccctcgtggca-ttgaggttggttgcccgtgtatatacggtaatat 4265 Query: 685 gccttccacttttaacaat-actttttgggggaaactttttgttaaattgttc 736 |||||||||||| | |||| ||| | ||| ||||||||| ||| ||||||||| Sbjct: 4264 gccttccactttaaccaataactatctggtggaaactttatgtgaaattgttc 4212 Database: Klactis 3X assemblage 11/02 Posted date: Nov 27, 2002 12:23 PM Number of letters in database: 10,358,551 Number of sequences in database: 1807 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 6205 Number of Sequences: 1807 Number of extensions: 6205 Number of successful extensions: 49 Number of sequences better than 1.0e-20: 1 length of query: 896 length of database: 10,358,551 effective HSP length: 16 effective length of query: 880 effective length of database: 10,329,639 effective search space: 9090082320 effective search space used: 9090082320 T: 0 A: 40 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 50 (99.6 bits)