BLASTN 2.2.3 [May-13-2002] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= FJ0AC28ZG11FM1.SCF screened BAC_end (958 letters) Database: Klactis 3X assemblage 11/02 1807 sequences; 10,358,551 total letters Searching....done Score E Sequences producing significant alignments: (bits) Value 3x_Contig1108 1114 0.0 >3x_Contig1108 Length = 6240 Score = 1114 bits (562), Expect = 0.0 Identities = 660/690 (95%), Gaps = 2/690 (0%) Strand = Plus / Plus Query: 89 cccatcaacttcgaaacagaaacaatgagggaaaactaatctgtgtcgtatgtattctcc 148 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 3203 cccatcaacttcgaaacagaaacaatgagggaaaactaatctgtgtcgtatgtattctcc 3262 Query: 149 ctgatcaacccttttcaaattattaattctcttgtgtgtcttgttaccggcttctttcat 208 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 3263 ctgatcaacccttttcaaattattaattctcttgtgtgtcttgttaccggcttctttcat 3322 Query: 209 gaattcgcatgtgtttttcatttccatatatcgtttgattttaacttagtattcaatttt 268 ||||||||| | ||||||||||||||||||||||||||||||||||||||||||| Sbjct: 3323 gaattcgcagggtcagctcatttccatatatcgtttgattttaacttagtattcaatttt 3382 Query: 269 taatttcgctgaaattctttctccttggtggtaaatagtatggagatatatggatggaat 328 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 3383 taatttcgctgaaattctttctccttggtggtaaatagtatggagatatatggatggaat 3442 Query: 329 ctgcgatgcgctacaaatttgacacatgatttgacgaaatgaaaagattgttgggttgaa 388 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 3443 ctgcgatgcgctacaaatttgacacatgatttgacgaaatgaaaagattgttgggttgaa 3502 Query: 389 tggctgcacccgtgaataaaacgtaatctaataatctcatcttattgtagtaggtgcttc 448 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 3503 tggctgcacccgtgaataaaacgtaatctaataatctcatcttattgtagtaggtgcttc 3562 Query: 449 accgggagtcacatcgatatgaatatgctacagtagttcggatctctataacttatttaa 508 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 3563 accgggagtcacatcgatatgaatatgctacagtagttcggatctctataacttatttaa 3622 Query: 509 aaacgagagagtatcacgtgatgtatatcatttcctcacatcatatctacattttgaaac 568 ||||||||||||||||||||||||||||||||| |||||||||||||||||| ||||||| Sbjct: 3623 aaacgagagagtatcacgtgatgtatatcattt-ctcacatcatatctacatcttgaaac 3681 Query: 569 tacagcaagactggcaggcgtgctaatgcttacaataggaaacagtgtggttcgcagata 628 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 3682 tacagcaagactggcaggcgtgctaatgcttacaataggaaacagtgtggttcgcagata 3741 Query: 629 ggggcgaatgaatgttgtgtgtttgcaaccttaaggaggaagaactcctttttttttaac 688 |||||||| |||||| |||| |||||||||||||||||||||||||||||| | ||| Sbjct: 3742 ggggcgaaggaatgtgtggtgtatgcaaccttaaggaggaagaactcctttttctcgaac 3801 Query: 689 ggtcaaccctcgatgcttgacattcaggtatttttaacttccattttcccaaaaaaaaaa 748 |||||||| ||||||| |||| ||||||| | |||| |||| | |||||||||||||| Sbjct: 3802 ggtcaacctccgatgctgtacatccaggtatatataac-tccaatatcccaaaaaaaaaa 3860 Query: 749 agaatggttgcaacacttcattaaaagggc 778 ||||||| |||||||| ||| ||||||||| Sbjct: 3861 agaatggctgcaacacgtcagtaaaagggc 3890 Database: Klactis 3X assemblage 11/02 Posted date: Nov 27, 2002 12:23 PM Number of letters in database: 10,358,551 Number of sequences in database: 1807 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 13,082 Number of Sequences: 1807 Number of extensions: 13082 Number of successful extensions: 93 Number of sequences better than 1.0e-20: 1 length of query: 958 length of database: 10,358,551 effective HSP length: 16 effective length of query: 942 effective length of database: 10,329,639 effective search space: 9730519938 effective search space used: 9730519938 T: 0 A: 40 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 51 (101.6 bits)