BLASTN 2.2.3 [May-13-2002] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= FJ0AC28ZH03FM1.SCF screened BAC_end (980 letters) Database: Klactis 3X assemblage 11/02 1807 sequences; 10,358,551 total letters Searching....done Score E Sequences producing significant alignments: (bits) Value 3x_Contig1770 946 0.0 >3x_Contig1770 Length = 29267 Score = 946 bits (477), Expect = 0.0 Identities = 555/571 (97%), Gaps = 9/571 (1%) Strand = Plus / Minus Query: 86 atcaattattatagaaagacgggagaaacagacagctccagaccaaaattacccgttggt 145 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 8035 atcaattattatagaaagacgggagaaacagacagctccagaccaaaattacccgttggt 7976 Query: 146 gagactcatgtattaggtgtgcaggataaatcaccattttggaattttggtttcgtcagt 205 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 7975 gagactcatgtattaggtgtgcaggataaatcaccattttggaattttggtttcgtcagt 7916 Query: 206 ccaggaaacattgttcccactttatataacaatatggtcagagcccccgttttcaaacat 265 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 7915 ccaggaaacattgttcccactttatataacaatatggtcagagcccccgttttcaaacat 7856 Query: 266 gaggtctctaagaccgatttccttctggtgaaaagtcttggtaatgggtccggtaacaga 325 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 7855 gaggtctctaagaccgatttccttctggtgaaaagtcttggtaatgggtccggtaacaga 7796 Query: 326 ttctatttgcgtcaaattaatcatctctttgctgtcggtcaaacgttcccagtggtcgaa 385 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 7795 ttctatttgcgtcaaattaatcatctctttgctgtcggtcaaacgttcccagtggtcgaa 7736 Query: 386 gttcctggtccgaattctagaaaggttactgctatgggtaagaaccgtttgaggatggtt 445 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 7735 gttcctggtccgaattctagaaaggttactgctatgggtaagaaccgtttgaggatggtt 7676 Query: 446 gtgtatcgtattttgaacaaatctccggaaaacagactgttagtgaaacaggtggctcgt 505 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 7675 gtgtatcgtattttgaacaaatctccggaaaacagactgttagtgaaacaggtggctcgt 7616 Query: 506 cattttcccgaacanaatgatatgcaaaacagacaaagattaaaggaattcatgaagttt 565 ||||| || ||||| ||||||||||||||||||||||||||||||||||||||||||| | Sbjct: 7615 catttcccagaacaaaatgatatgcaaaacagacaaagattaaaggaattcatgaagtat 7556 Query: 566 taacgtggaaagtgaatgatcaagggtttctggaaaactaaaggaggggaggaagtttta 625 ||||| ||| ||| |||||||| ||||||||| |||||||||||||| ||||||||| Sbjct: 7555 caacgt-gaaggtg-atgatcaa-ggtttctgg-aaactaaaggaggg--agaagtttta 7502 Query: 626 cttggataacgaaanacgtgaaagaaaatgg 656 | |||||||||||| ||||| |||||||||| Sbjct: 7501 c-tggataacgaaa-acgtg-aagaaaatgg 7474 Database: Klactis 3X assemblage 11/02 Posted date: Nov 27, 2002 12:23 PM Number of letters in database: 10,358,551 Number of sequences in database: 1807 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 7259 Number of Sequences: 1807 Number of extensions: 7259 Number of successful extensions: 36 Number of sequences better than 1.0e-20: 1 length of query: 980 length of database: 10,358,551 effective HSP length: 16 effective length of query: 964 effective length of database: 10,329,639 effective search space: 9957771996 effective search space used: 9957771996 T: 0 A: 40 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 51 (101.6 bits)