BLASTN 2.2.3 [May-13-2002] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= FJ0AC28ZH03RM1.SCF screened BAC_end (892 letters) Database: Klactis 3X assemblage 11/02 1807 sequences; 10,358,551 total letters Searching....done Score E Sequences producing significant alignments: (bits) Value 3x_Contig1595 1176 0.0 >3x_Contig1595 Length = 10795 Score = 1176 bits (593), Expect = 0.0 Identities = 646/657 (98%), Gaps = 5/657 (0%) Strand = Plus / Plus Query: 45 cttcccatgtactgttaaatcgttatgcactgttcttacactgaatatcttggaaacaca 104 ||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||| Sbjct: 8812 cttcccatgtactgttaaatcgtaatgcactgttcttacactgaatatcttggaaacaca 8871 Query: 105 catcttgccagaagatcttcggcgaattcttgttagccaccacatgatcatatattacct 164 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 8872 catcttgccagaagatcttcggcgaattcttgttagccaccacatgatcatatattacct 8931 Query: 165 cagtacctacggatcccttcaactctgatgcagcaccgcatgaacaatcgggctttatca 224 ||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| Sbjct: 8932 cagtacctacggatcccttcaactctgatgcagcaccgcatgaacaatcgggcaacatca 8991 Query: 225 cctgctgctgcaaccgaatccgaactacgtccataggagttaaaaaaaaggacgtcaaga 284 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 8992 cctgctgctgcaaccgaatccgaactacgtccataggagttaaaaaaaaggacgtcaaga 9051 Query: 285 aagagcccgcacatgcactgagcatccgctccttcatgatagctgtcgagctccgatcgc 344 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9052 aagagcccgcacatgcactgagcatccgctccttcatgatagctgtcgagctccgatcgc 9111 Query: 345 cagacattactcttcacttttctctcttaaattaacgctttagaaacccctttaactagt 404 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9112 cagacattactcttcacttttctctcttaaattaacgctttagaaacccctttaactagt 9171 Query: 405 cgggatgactgaagatttatcagcaacggtgtgtatctttaaatcattttgaattatttt 464 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9172 cgggatgactgaagatttatcagcaacggtgtgtatctttaaatcattttgaattatttt 9231 Query: 465 aattctttctagtttaaaggacttttcatttcttttacattatcaacactttttcaatat 524 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9232 aattctttctagtttaaaggacttttcatttcttttacattatcaacactttttcaatat 9291 Query: 525 attagaacaataagaatgtgacaccggtagtgacagcgtgaagtccagcaatattaatat 584 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9292 attagaacaataagaatgtgacaccggtagtgacagcgtgaagtccagcaatattaatat 9351 Query: 585 tgaatttcctgctctgatggtcctcggttcttatggg-attttttttctcttacc-tata 642 ||||||||||||||||||||||||||||||||||||| ||||||||||||||||| |||| Sbjct: 9352 tgaatttcctgctctgatggtcctcggttcttatgggaattttttttctcttaccttata 9411 Query: 643 cagataaacac-tatctaggggtatagttta-taattagtgctggaa-tcttttttg 696 ||||||||||| ||||||| ||||||||||| |||||||||||| || ||||||||| Sbjct: 9412 cagataaacacatatctagtggtatagtttattaattagtgctgtaattcttttttg 9468 Database: Klactis 3X assemblage 11/02 Posted date: Nov 27, 2002 12:23 PM Number of letters in database: 10,358,551 Number of sequences in database: 1807 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 7466 Number of Sequences: 1807 Number of extensions: 7466 Number of successful extensions: 47 Number of sequences better than 1.0e-20: 1 length of query: 892 length of database: 10,358,551 effective HSP length: 16 effective length of query: 876 effective length of database: 10,329,639 effective search space: 9048763764 effective search space used: 9048763764 T: 0 A: 40 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 50 (99.6 bits)