BLASTN 2.2.3 [May-13-2002] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= FJ0AC28ZH11FM1.SCF screened BAC_end (957 letters) Database: Klactis 3X assemblage 11/02 1807 sequences; 10,358,551 total letters Searching....done Score E Sequences producing significant alignments: (bits) Value 3x_Contig1581 1243 0.0 >3x_Contig1581 Length = 11429 Score = 1243 bits (627), Expect = 0.0 Identities = 683/699 (97%), Gaps = 2/699 (0%) Strand = Plus / Minus Query: 87 cgatgtgaaaaactcgggaaaactacagcattattatgagaatgactatgcatcgaaatt 146 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10975 cgatgtgaaaaactcgggaaaactacagcattattatgagaatgactatgcatcgaaatt 10916 Query: 147 acttgcaaattgtggaatcaaagaatggttaaaattgaaaggttatgagtccttagcaca 206 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10915 acttgcaaattgtggaatcaaagaatggttaaaattgaaaggttatgagtccttagcaca 10856 Query: 207 aaaatgaaatattatctcgcaattacgctatcagaaaagtttaaatagaatgaaacctgt 266 |||||||||||||| | ||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10855 aaaatgaaatattagcacgcaattacgctatcagaaaagtttaaatagaatgaaacctgt 10796 Query: 267 acatatgatgaatgtaataaatatgatatgctaattaatttaaagatgtataaatttata 326 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10795 acatatgatgaatgtaataaatatgatatgctaattaatttaaagatgtataaatttata 10736 Query: 327 aaggttgtgtatctgattatgcagcgcatgaaaacgagataggaatgtatatagtagcca 386 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10735 aaggttgtgtatctgattatgcagcgcatgaaaacgagataggaatgtatatagtagcca 10676 Query: 387 ggttaaaattatgtattaatgatgtctcgatgttgaagggaaggcgtaagttttaaaaca 446 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10675 ggttaaaattatgtattaatgatgtctcgatgttgaagggaaggcgtaagttttaaaaca 10616 Query: 447 agtttgggaatagttgtggatggcattttagaatctcttcatattgaagcccactgctaa 506 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10615 agtttgggaatagttgtggatggcattttagaatctcttcatattgaagcccactgctaa 10556 Query: 507 tgtcttggaaatcatataacatatagcagagacaaatgacgtgacaccgcaccaaattac 566 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10555 tgtcttggaaatcatataacatatagcagagacaaatgacgtgacaccgcaccaaattac 10496 Query: 567 atagtgggcatagcccttgaaactcttttctggtccgatgatggcacctgttatagggaa 626 ||||||| ||||||||||||||||||||||||||||||||||||||||||| ||| |||| Sbjct: 10495 atagtggtcatagcccttgaaactcttttctggtccgatgatggcacctgtaata-ggaa 10437 Query: 627 ctgctactaaagtaccaaatgcgacaccaaagtacattgtaaaatatcttcttccgaatt 686 |||||||||||||||||||||||||| |||||||||||||| |||||||||||||||||| Sbjct: 10436 ctgctactaaagtaccaaatgcgacaacaaagtacattgtagaatatcttcttccgaatt 10377 Query: 687 cttcagtccttgaaatttgtccacaggagacaggttagatactgaagattcttccggaag 746 |||||||| |||| |||||||||||| |||||||| ||||||||||||| |||||||||| Sbjct: 10376 cttcagtctttgagatttgtccacagcagacaggtaagatactgaagatacttccggaag 10317 Query: 747 aaaaatcataaatggcacttgaatgcaaataacaccgct 785 |||| |||||||||||| ||||||| |||||||||||| Sbjct: 10316 aaaatccataaatggcac-tgaatgcgaataacaccgct 10279 Database: Klactis 3X assemblage 11/02 Posted date: Nov 27, 2002 12:23 PM Number of letters in database: 10,358,551 Number of sequences in database: 1807 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 7224 Number of Sequences: 1807 Number of extensions: 7224 Number of successful extensions: 42 Number of sequences better than 1.0e-20: 1 length of query: 957 length of database: 10,358,551 effective HSP length: 16 effective length of query: 941 effective length of database: 10,329,639 effective search space: 9720190299 effective search space used: 9720190299 T: 0 A: 40 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 51 (101.6 bits)