BLASTN 2.2.3 [May-13-2002] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= FJ0AC29ZA01RM1.SCF screened BAC_end (931 letters) Database: Klactis 3X assemblage 11/02 1807 sequences; 10,358,551 total letters Searching....done Score E Sequences producing significant alignments: (bits) Value 3x_Contig1664 1181 0.0 >3x_Contig1664 Length = 15696 Score = 1181 bits (596), Expect = 0.0 Identities = 673/692 (97%), Gaps = 5/692 (0%) Strand = Plus / Minus Query: 47 atccttcaattccttgtgtctagcgaacaattcagcttcagatttctgtaacttcttttc 106 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 8235 atccttcaattccttgtgtctagcgaacaattcagcttcagatttctgtaacttcttttc 8176 Query: 107 cttttcttcaactttctgttggaatactgccttcatttcagcttccaatttagctagttt 166 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 8175 cttttcttcaactttctgttggaatactgccttcatttcagcttccaatttagctagttt 8116 Query: 167 gacttcgtgtagttgtttttcctccttttgtctagtttctggatcgaaattcttgaagac 226 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 8115 gacttcgtgtagttgtttttcctccttttgtctagtttctggatcgaaattcttgaagac 8056 Query: 227 actgttgtcttgtttgatacccaatcctaatagcttttcagatctatatttttcgtataa 286 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 8055 actgttgtcttgtttgatacccaatcctaatagcttttcagatctatatttttcgtataa 7996 Query: 287 tactttgttagtcctttcgcgtaattcttccaagtattgtctaattaatagatctcttaa 346 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 7995 tactttgttagtcctttcgcgtaattcttccaagtattgtctaattaatagatctcttaa 7936 Query: 347 atatacaaaatcagaatgttttgtgttgtcaacttcgatgacaccccatgggtaagccct 406 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 7935 atatacaaaatcagaatgttttgtgttgtcaacttcgatgacaccccatgggtaagccct 7876 Query: 407 acctctaacttttctaccgtcttctgtagtgacttgttcagtggaaccgacaatggcaaa 466 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 7875 acctctaacttttctaccgtcttctgtagtgacttgttcagtggaaccgacaatggcaaa 7816 Query: 467 aggaatcttttcaaagatgttttcagtttgaagtttcatctcccagcatagaatattgag 526 |||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| Sbjct: 7815 aggaatcttttcaaagatgttttcag-ttgaagtttcatctcccagcatagaatattgag 7757 Query: 527 gtggttcaaacaactgcacgttggcttgttctagttggttcttgatggtggcttttgaag 586 ||||||||||||||||||||||||||||||||||||| ||||||||||||||||| ||| Sbjct: 7756 gtggttcaaacaactgcacgttggcttgttctagttgtttcttgatggtggctttgaaag 7697 Query: 587 tgacaatttctttcgtc-gttaagatgtcagatttggcgattacggggattcagtttcat 645 |||||||||| |||||| ||||||||||||||||||||||| |||||||| |||| || Sbjct: 7696 tgacaatttc-ttcgtcagttaagatgtcagatttggcgataacggggatcaagttaca- 7639 Query: 646 tttggaatgaacctgcttgccgaattccaaattcaacggctttaaaccatgacccgttgg 705 |||||||||||||||||||| ||||||||||| ||||||||| ||||||||||| || || Sbjct: 7638 tttggaatgaacctgcttgcagaattccaaatccaacggcttcaaaccatgaccagtagg 7579 Query: 706 tttcgataaagtagaaacaagcttgaatcctg 737 |||||||||||||| |||||| ||||||||| Sbjct: 7578 -ttcgataaagtagagacaagcatgaatcctg 7548 Database: Klactis 3X assemblage 11/02 Posted date: Nov 27, 2002 12:23 PM Number of letters in database: 10,358,551 Number of sequences in database: 1807 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 9676 Number of Sequences: 1807 Number of extensions: 9676 Number of successful extensions: 100 Number of sequences better than 1.0e-20: 1 length of query: 931 length of database: 10,358,551 effective HSP length: 16 effective length of query: 915 effective length of database: 10,329,639 effective search space: 9451619685 effective search space used: 9451619685 T: 0 A: 40 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 50 (99.6 bits)