BLASTN 2.2.3 [May-13-2002] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= FJ0AC29ZA04FM1.SCF screened BAC_end (930 letters) Database: Klactis 3X assemblage 11/02 1807 sequences; 10,358,551 total letters Searching....done Score E Sequences producing significant alignments: (bits) Value 3x_Contig1382 1342 0.0 >3x_Contig1382 Length = 8314 Score = 1342 bits (677), Expect = 0.0 Identities = 716/727 (98%), Gaps = 2/727 (0%) Strand = Plus / Minus Query: 87 tcaaacatctctaaagcaaacttcttatcattcccactcccgtcttttctcgtattgctg 146 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1692 tcaaacatctctaaagcaaacttcttatcattcccactcccgtcttttctcgtattgctg 1633 Query: 147 ccagataaaaccgaattaccatcttgatccagaacggtttctgaaaactctaccctccgc 206 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1632 ccagataaaaccgaattaccatcttgatccagaacggtttctgaaaactctaccctccgc 1573 Query: 207 ctcttcttatcagaaccactgatcatagcagaactaaggtcagtgcattgtctcttctgt 266 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1572 ctcttcttatcagaaccactgatcatagcagaactaaggtcagtgcattgtctcttctgt 1513 Query: 267 ccattctccatagccatcatatttgcatcacagaaagacaaatcctataattctttctcc 326 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1512 ccattctccatagccatcatatttgcatcacagaaagacaaatcctataattctttctcc 1453 Query: 327 aataaaaaaacaagaaaagcactgaatcaggaaaacaaggttattcaacaatagaaagat 386 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1452 aataaaaaaacaagaaaagcactgaatcaggaaaacaaggttattcaacaatagaaagat 1393 Query: 387 caggctcgattgcaatatgtcaaaacacagcgatatggatagtatatagcacttgaatca 446 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1392 caggctcgattgcaatatgtcaaaacacagcgatatggatagtatatagcacttgaatca 1333 Query: 447 ctgttttgtctcctgtttcacacagttatgttactgaaagatgcgatgagctgcaaattc 506 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1332 ctgttttgtctcctgtttcacacagttatgttactgaaagatgcgatgagctgcaaattc 1273 Query: 507 caatttttggaactgaaaaatttataaaaagaaataaaggtcacgtgctaaatacaacaa 566 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1272 caatttttggaactgaaaaatttataaaaagaaataaaggtcacgtgctaaatacaacaa 1213 Query: 567 aaggtaatggaccgttcctgaagtgcaagattctcatcagttgatgttattgaacagtat 626 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1212 aaggtaatggaccgttcctgaagtgcaagattctcatcagttgatgttattgaacagtat 1153 Query: 627 ataacaatgcgtactcttagtatatatatatatatgtatatatgngaagntattggtttt 686 |||||||||||||||||||||||||||||||||||||||||||| |||| |||||||||| Sbjct: 1152 ataacaatgcgtactcttagtatatatatatatatgtatatatgtgaagttattggtttt 1093 Query: 687 agcttttgtttc-agttttgaaggatctgtcgggcagcatgtatttgcccagttgtttcg 745 |||||||||||| ||||| |||||||||||||||||||||| ||| ||||||||||| || Sbjct: 1092 agcttttgtttcaagtttggaaggatctgtcgggcagcatggattggcccagttgttccg 1033 Query: 746 agccaacat-agtccattcaccaaattgttgttgcaccgaatcacttaagaaatcgttga 804 ||||||||| ||||||| |||||||||||||||||||||| ||||||| ||||||||||| Sbjct: 1032 agccaacataagtccatccaccaaattgttgttgcaccgattcacttaggaaatcgttga 973 Query: 805 caacact 811 ||||||| Sbjct: 972 caacact 966 Database: Klactis 3X assemblage 11/02 Posted date: Nov 27, 2002 12:23 PM Number of letters in database: 10,358,551 Number of sequences in database: 1807 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 11,305 Number of Sequences: 1807 Number of extensions: 11305 Number of successful extensions: 1458 Number of sequences better than 1.0e-20: 1 length of query: 930 length of database: 10,358,551 effective HSP length: 16 effective length of query: 914 effective length of database: 10,329,639 effective search space: 9441290046 effective search space used: 9441290046 T: 0 A: 40 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 50 (99.6 bits)