BLASTN 2.2.3 [May-13-2002] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= FJ0AC29ZB02FM1.SCF screened BAC_end (916 letters) Database: Klactis 3X assemblage 11/02 1807 sequences; 10,358,551 total letters Searching....done Score E Sequences producing significant alignments: (bits) Value 3x_Contig1498 1304 0.0 >3x_Contig1498 Length = 12634 Score = 1304 bits (658), Expect = 0.0 Identities = 757/774 (97%), Gaps = 12/774 (1%) Strand = Plus / Minus Query: 87 agggctagatgccatcaaagagttaatgacgtatctaagaaaatggttagatcatgaagt 146 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 8243 agggctagatgccatcaaagagttaatgacgtatctaagaaaatggttagatcatgaagt 8184 Query: 147 atacaagcatcagacttcaacttatcaaaaacagttggaactggaaaagcagtatagaaa 206 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 8183 atacaagcatcagacttcaacttatcaaaaacagttggaactggaaaagcagtatagaaa 8124 Query: 207 ggcacccaaagaggttgtgaaataggacactggcacaacacaagctcaaataaagagctg 266 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 8123 ggcacccaaagaggttgtgaaataggacactggcacaacacaagctcaaataaagagctg 8064 Query: 267 ttaaatatatttctctgcgtcctcgtcttaccattgtcatctctccacttgtaaatagaa 326 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 8063 ttaaatatatttctctgcgtcctcgtcttaccattgtcatctctccacttgtaaatagaa 8004 Query: 327 tatcggagagaatgaaaactaggcctgacgtatataccttagcatcaacatcatcaacaa 386 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 8003 tatcggagagaatgaaaactaggcctgacgtatataccttagcatcaacatcatcaacaa 7944 Query: 387 caaaatttaattcagcatttcaatatatgtaaagatatatgtatatttattcgagaataa 446 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 7943 caaaatttaattcagcatttcaatatatgtaaagatatatgtatatttattcgagaataa 7884 Query: 447 tatcccaattataagaactcttacttagccgtacgctatatcttcgtctcttgtgcatta 506 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 7883 tatcccaattataagaactcttacttagccgtacgctatatcttcgtctcttgtgcatta 7824 Query: 507 cattgttgccattatttcgttcagtttcttaaaaagaaaagcccttaagaccaaaaacag 566 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 7823 cattgttgccattatttcgttcagtttcttaaaaagaaaagcccttaagaccaaaaacag 7764 Query: 567 gaaaaaacctttaaaaagctgcgattgcgaaacaatacatcgcgagatgattagggatac 626 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 7763 gaaaaaacctttaaaaagctgcgattgcgaaacaatacatcgcgagatgattagggatac 7704 Query: 627 attattcaattggatggcaggcgaacccgctttatattaagaaacgataactttcgatct 686 ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| Sbjct: 7703 attattcaattggatggcaggcgaacccgctttatattaagaaacgataac-ttcgatct 7645 Query: 687 tcacctcatttatc-agatgaacggacatttacatacggttataccgaaaaaattcaatg 745 |||||||| ||||| ||||||||||||||||||||||||||||||||||||||| |||| Sbjct: 7644 tcacctca-ttatcaagatgaacggacatttacatacggttataccgaaaaaatccaat- 7587 Query: 746 gcggatcattttacgaatcgtggggcagagtggcttgattccacagtgatgcacgatatg 805 |||||||| |||||||||||| ||||||||| ||||||||||||||| |||||||||||| Sbjct: 7586 gcggatca-tttacgaatcgt-gggcagagt-gcttgattccacagt-atgcacgatatg 7531 Query: 806 ccaccgattttttgttttgtaccaatcatggacgagcctgtggacccaactatt 859 ||| ||||| | || ||||||||| |||| |||||| |||||||| |||||||| Sbjct: 7530 cca-cgattatatg-tttgtaccagtcat-gacgag-ctgtggacacaactatt 7481 Database: Klactis 3X assemblage 11/02 Posted date: Nov 27, 2002 12:23 PM Number of letters in database: 10,358,551 Number of sequences in database: 1807 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 7206 Number of Sequences: 1807 Number of extensions: 7206 Number of successful extensions: 69 Number of sequences better than 1.0e-20: 1 length of query: 916 length of database: 10,358,551 effective HSP length: 16 effective length of query: 900 effective length of database: 10,329,639 effective search space: 9296675100 effective search space used: 9296675100 T: 0 A: 40 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 50 (99.6 bits)