BLASTN 2.2.3 [May-13-2002]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= FJ0AC29ZB02FM1.SCF screened BAC_end
         (916 letters)

Database: Klactis 3X assemblage 11/02 
           1807 sequences; 10,358,551 total letters

Searching....done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

3x_Contig1498                                                        1304   0.0  

>3x_Contig1498 
          Length = 12634

 Score = 1304 bits (658), Expect = 0.0
 Identities = 757/774 (97%), Gaps = 12/774 (1%)
 Strand = Plus / Minus

                                                                        
Query: 87   agggctagatgccatcaaagagttaatgacgtatctaagaaaatggttagatcatgaagt 146
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 8243 agggctagatgccatcaaagagttaatgacgtatctaagaaaatggttagatcatgaagt 8184

                                                                        
Query: 147  atacaagcatcagacttcaacttatcaaaaacagttggaactggaaaagcagtatagaaa 206
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 8183 atacaagcatcagacttcaacttatcaaaaacagttggaactggaaaagcagtatagaaa 8124

                                                                        
Query: 207  ggcacccaaagaggttgtgaaataggacactggcacaacacaagctcaaataaagagctg 266
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 8123 ggcacccaaagaggttgtgaaataggacactggcacaacacaagctcaaataaagagctg 8064

                                                                        
Query: 267  ttaaatatatttctctgcgtcctcgtcttaccattgtcatctctccacttgtaaatagaa 326
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 8063 ttaaatatatttctctgcgtcctcgtcttaccattgtcatctctccacttgtaaatagaa 8004

                                                                        
Query: 327  tatcggagagaatgaaaactaggcctgacgtatataccttagcatcaacatcatcaacaa 386
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 8003 tatcggagagaatgaaaactaggcctgacgtatataccttagcatcaacatcatcaacaa 7944

                                                                        
Query: 387  caaaatttaattcagcatttcaatatatgtaaagatatatgtatatttattcgagaataa 446
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 7943 caaaatttaattcagcatttcaatatatgtaaagatatatgtatatttattcgagaataa 7884

                                                                        
Query: 447  tatcccaattataagaactcttacttagccgtacgctatatcttcgtctcttgtgcatta 506
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 7883 tatcccaattataagaactcttacttagccgtacgctatatcttcgtctcttgtgcatta 7824

                                                                        
Query: 507  cattgttgccattatttcgttcagtttcttaaaaagaaaagcccttaagaccaaaaacag 566
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 7823 cattgttgccattatttcgttcagtttcttaaaaagaaaagcccttaagaccaaaaacag 7764

                                                                        
Query: 567  gaaaaaacctttaaaaagctgcgattgcgaaacaatacatcgcgagatgattagggatac 626
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 7763 gaaaaaacctttaaaaagctgcgattgcgaaacaatacatcgcgagatgattagggatac 7704

                                                                        
Query: 627  attattcaattggatggcaggcgaacccgctttatattaagaaacgataactttcgatct 686
            ||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||
Sbjct: 7703 attattcaattggatggcaggcgaacccgctttatattaagaaacgataac-ttcgatct 7645

                                                                        
Query: 687  tcacctcatttatc-agatgaacggacatttacatacggttataccgaaaaaattcaatg 745
            |||||||| ||||| ||||||||||||||||||||||||||||||||||||||| |||| 
Sbjct: 7644 tcacctca-ttatcaagatgaacggacatttacatacggttataccgaaaaaatccaat- 7587

                                                                        
Query: 746  gcggatcattttacgaatcgtggggcagagtggcttgattccacagtgatgcacgatatg 805
            |||||||| |||||||||||| ||||||||| ||||||||||||||| ||||||||||||
Sbjct: 7586 gcggatca-tttacgaatcgt-gggcagagt-gcttgattccacagt-atgcacgatatg 7531

                                                                  
Query: 806  ccaccgattttttgttttgtaccaatcatggacgagcctgtggacccaactatt 859
            ||| ||||| | || ||||||||| |||| |||||| |||||||| ||||||||
Sbjct: 7530 cca-cgattatatg-tttgtaccagtcat-gacgag-ctgtggacacaactatt 7481


  Database: Klactis 3X assemblage 11/02
    Posted date:  Nov 27, 2002 12:23 PM
  Number of letters in database: 10,358,551
  Number of sequences in database:  1807
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 7206
Number of Sequences: 1807
Number of extensions: 7206
Number of successful extensions: 69
Number of sequences better than 1.0e-20: 1
length of query: 916
length of database: 10,358,551
effective HSP length: 16
effective length of query: 900
effective length of database: 10,329,639
effective search space: 9296675100
effective search space used: 9296675100
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 50 (99.6 bits)