BLASTN 2.2.3 [May-13-2002] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= FJ0AC29ZB07RM1.SCF screened BAC_end (919 letters) Database: Klactis 3X assemblage 11/02 1807 sequences; 10,358,551 total letters Searching....done Score E Sequences producing significant alignments: (bits) Value 3x_Contig1281 1449 0.0 >3x_Contig1281 Length = 7825 Score = 1449 bits (731), Expect = 0.0 Identities = 809/830 (97%), Gaps = 4/830 (0%) Strand = Plus / Minus Query: 49 acatattgtgaagaatgactggttgcagattttgggagagatgccaatagctgcaacata 108 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1466 acatattgtgaagaatgactggttgcagattttgggagagatgccaatagctgcaacata 1407 Query: 109 ttttcgctcaaaatcttacttatcacagcttgaacatctgcctcccatgattggtcgaga 168 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1406 ttttcgctcaaaatcttacttatcacagcttgaacatctgcctcccatgattggtcgaga 1347 Query: 169 gataataaaaactccaagtattccgtgaacaatagcatacccgcatggaccactggccaa 228 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1346 gataataaaaactccaagtattccgtgaacaatagcatacccgcatggaccactggccaa 1287 Query: 229 ttcttttgttcataactctctctcaaatattttgtaaagagaatgtaacactcatctaac 288 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1286 ttcttttgttcataactctctctcaaatattttgtaaagagaatgtaacactcatctaac 1227 Query: 289 aatgcgcctgagacataatccggtgtagcatcaatttcataaatgcaccgtgatctctgg 348 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1226 aatgcgcctgagacataatccggtgtagcatcaatttcataaatgcaccgtgatctctgg 1167 Query: 349 aatttcacaaaccacgaaatgaataacatgtattcaatcttatgcaatggtaattgatct 408 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1166 aatttcacaaaccacgaaatgaataacatgtattcaatcttatgcaatggtaattgatct 1107 Query: 409 tgaatttcactcgtaaaactatctgtggcattttgcaataacaaattgaaactggaatca 468 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1106 tgaatttcactcgtaaaactatctgtggcattttgcaataacaaattgaaactggaatca 1047 Query: 469 acaaaatctgccaaaaactcttttatgctagtaatgttgtcagaagacatgtaaatagaa 528 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1046 acaaaatctgccaaaaactcttttatgctagtaatgttgtcagaagacatgtaaatagaa 987 Query: 529 ttaccttcagtactaaaaaagctgctactgagtccttcaataacatcgagtctcatagtg 588 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 986 ttaccttcagtactaaaaaagctgctactgagtccttcaataacatcgagtctcatagtg 927 Query: 589 atggttntattccatttttttcttgagtctaactcttgtaatgccgcatcatcacgcatg 648 |||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 926 atggttttattccatttttttcttgagtctaactcttgtaatgccgcatcatcacgcatg 867 Query: 649 ttgacagaattactagcaattgtcaatcgcgtattttgaggtgtctgtatagacatttaa 708 ||||||||||||||||||||||||||||||||||||||||||||||||||||||| | || Sbjct: 866 ttgacagaattactagcaattgtcaatcgcgtattttgaggtgtctgtatagacaataaa 807 Query: 709 ccgccaattct-gaatgacgagaagaagtattcttatttacattaagctctttttcatgt 767 ||||||| ||| ||||||||||||||||||||||| |||||||||||| ||||||||| Sbjct: 806 ccgccaaatctagaatgacgagaagaagtattctttattacattaagcttcttttcatgt 747 Query: 768 tcctttgcaagtatttctgaaaagtgtttacctgacgttgtaatgttggagtctggtaat 827 ||||||||||||| |||||||| |||||||||||||||||| |||||||||||| ||||| Sbjct: 746 tcctttgcaagtaattctgaaaggtgtttacctgacgttgtcatgttggagtct-gtaat 688 Query: 828 cttgggacccgtaccc-atttataaaaattttttttggtttttgaacaat 876 || | || |||||||| |||||| || ||||| | ||||||||||||||| Sbjct: 687 ctcgtgatccgtacccaatttat-aagattttctctggtttttgaacaat 639 Database: Klactis 3X assemblage 11/02 Posted date: Nov 27, 2002 12:23 PM Number of letters in database: 10,358,551 Number of sequences in database: 1807 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 7936 Number of Sequences: 1807 Number of extensions: 7936 Number of successful extensions: 84 Number of sequences better than 1.0e-20: 1 length of query: 919 length of database: 10,358,551 effective HSP length: 16 effective length of query: 903 effective length of database: 10,329,639 effective search space: 9327664017 effective search space used: 9327664017 T: 0 A: 40 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 50 (99.6 bits)