BLASTN 2.2.3 [May-13-2002] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= FJ0AC29ZB09FM1.SCF screened BAC_end (936 letters) Database: Klactis 3X assemblage 11/02 1807 sequences; 10,358,551 total letters Searching....done Score E Sequences producing significant alignments: (bits) Value 3x_Contig1746 1558 0.0 >3x_Contig1746 Length = 26672 Score = 1558 bits (786), Expect = 0.0 Identities = 838/850 (98%), Gaps = 4/850 (0%) Strand = Plus / Minus Query: 86 taagaacttataggcatgctccaaatactggttccaggaaatcttgggctgccggtgacg 145 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 22227 taagaacttataggcatgctccaaatactggttccaggaaatcttgggctgccggtgacg 22168 Query: 146 cagtggcaagagctgtcaacattgcatatttggtgaagaatggaagtccaggtacaattc 205 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 22167 cagtggcaagagctgtcaacattgcatatttggtgaagaatggaagtccaggtacaattc 22108 Query: 206 cttccgtactaaccgctaagacatggggtttttatgacgttcttttcaaaggtaaaccat 265 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 22107 cttccgtactaaccgctaagacatggggtttttatgacgttcttttcaaaggtaaaccat 22048 Query: 266 tcaccttccagcaaagggacactttcggttcttatgtgatggaaaacgttcttttcaaga 325 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 22047 tcaccttccagcaaagggacactttcggttcttatgtgatggaaaacgttcttttcaaga 21988 Query: 326 tatcgttcccagcagaattccatgctcaaacggcagtggaagcagctattaaggtgaata 385 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 21987 tatcgttcccagcagaattccatgctcaaacggcagtggaagcagctattaaggtgaata 21928 Query: 386 aacagttggcagagttgggcaaaacttacaaagacattaaaaaggtcagaattagaactc 445 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 21927 aacagttggcagagttgggcaaaacttacaaagacattaaaaaggtcagaattagaactc 21868 Query: 446 aagaagccgctgtgagaattattgacaaggagggtccattgtacaattatgctgacagag 505 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 21867 aagaagccgctgtgagaattattgacaaggagggtccattgtacaattatgctgacagag 21808 Query: 506 atcattgtattcaatacatgactgctattccattaatttacggtagactaacggctgacg 565 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 21807 atcattgtattcaatacatgactgctattccattaatttacggtagactaacggctgacg 21748 Query: 566 attacagtgatgaagtagcaagcaaccctgaaattgacgaattgagagctaagatgtatt 625 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 21747 attacagtgatgaagtagcaagcaaccctgaaattgacgaattgagagctaagatgtatt 21688 Query: 626 gtactaaagatgaccaattcactttggattatcatgatccatcaaagagatcaatcccaa 685 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 21687 gtactaaagatgaccaattcactttggattatcatgatccatcaaagagatcaatcccaa 21628 Query: 686 acgctttgttagtagaattgaatgatgggactgtcttagatgaagtggtcgtagaatatc 745 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 21627 acgctttgttagtagaattgaatgatgggactgtcttagatgaagtggtcgtagaatatc 21568 Query: 746 caatcggtcacagactaagaagaaagg-aggtgtcccactattgatgcagaaattctacc 804 ||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| Sbjct: 21567 caatcggtcacagactaagaagaaaggaaggtgtcccactattgatgcagaaattctacc 21508 Query: 805 accatttgcgtgaacattccgccggcgatattgaaaa-gtggaagcttttatggaagc-a 862 |||||||||||||||||| |||||||||||||||||| ||||||||||| |||||||| | Sbjct: 21507 accatttgcgtgaacatttcgccggcgatattgaaaaggtggaagctttaatggaagcaa 21448 Query: 863 gttcagnatgacggtttctttaacttaactggtgatgaatttgtcaacatgttctgcgaa 922 || ||| ||||||||||||| |||||||||| |||||||| ||||||||||| |||||| Sbjct: 21447 gtacag-atgacggtttcttaaacttaactgttgatgaatatgtcaacatgtactgcgat 21389 Query: 923 taagctttgt 932 |||||||||| Sbjct: 21388 taagctttgt 21379 Database: Klactis 3X assemblage 11/02 Posted date: Nov 27, 2002 12:23 PM Number of letters in database: 10,358,551 Number of sequences in database: 1807 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 5955 Number of Sequences: 1807 Number of extensions: 5955 Number of successful extensions: 38 Number of sequences better than 1.0e-20: 1 length of query: 936 length of database: 10,358,551 effective HSP length: 16 effective length of query: 920 effective length of database: 10,329,639 effective search space: 9503267880 effective search space used: 9503267880 T: 0 A: 40 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 50 (99.6 bits)