BLASTN 2.2.3 [May-13-2002]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= FJ0AC29ZB09FM1.SCF screened BAC_end
         (936 letters)

Database: Klactis 3X assemblage 11/02 
           1807 sequences; 10,358,551 total letters

Searching....done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

3x_Contig1746                                                        1558   0.0  

>3x_Contig1746 
          Length = 26672

 Score = 1558 bits (786), Expect = 0.0
 Identities = 838/850 (98%), Gaps = 4/850 (0%)
 Strand = Plus / Minus

                                                                         
Query: 86    taagaacttataggcatgctccaaatactggttccaggaaatcttgggctgccggtgacg 145
             ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 22227 taagaacttataggcatgctccaaatactggttccaggaaatcttgggctgccggtgacg 22168

                                                                         
Query: 146   cagtggcaagagctgtcaacattgcatatttggtgaagaatggaagtccaggtacaattc 205
             ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 22167 cagtggcaagagctgtcaacattgcatatttggtgaagaatggaagtccaggtacaattc 22108

                                                                         
Query: 206   cttccgtactaaccgctaagacatggggtttttatgacgttcttttcaaaggtaaaccat 265
             ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 22107 cttccgtactaaccgctaagacatggggtttttatgacgttcttttcaaaggtaaaccat 22048

                                                                         
Query: 266   tcaccttccagcaaagggacactttcggttcttatgtgatggaaaacgttcttttcaaga 325
             ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 22047 tcaccttccagcaaagggacactttcggttcttatgtgatggaaaacgttcttttcaaga 21988

                                                                         
Query: 326   tatcgttcccagcagaattccatgctcaaacggcagtggaagcagctattaaggtgaata 385
             ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 21987 tatcgttcccagcagaattccatgctcaaacggcagtggaagcagctattaaggtgaata 21928

                                                                         
Query: 386   aacagttggcagagttgggcaaaacttacaaagacattaaaaaggtcagaattagaactc 445
             ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 21927 aacagttggcagagttgggcaaaacttacaaagacattaaaaaggtcagaattagaactc 21868

                                                                         
Query: 446   aagaagccgctgtgagaattattgacaaggagggtccattgtacaattatgctgacagag 505
             ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 21867 aagaagccgctgtgagaattattgacaaggagggtccattgtacaattatgctgacagag 21808

                                                                         
Query: 506   atcattgtattcaatacatgactgctattccattaatttacggtagactaacggctgacg 565
             ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 21807 atcattgtattcaatacatgactgctattccattaatttacggtagactaacggctgacg 21748

                                                                         
Query: 566   attacagtgatgaagtagcaagcaaccctgaaattgacgaattgagagctaagatgtatt 625
             ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 21747 attacagtgatgaagtagcaagcaaccctgaaattgacgaattgagagctaagatgtatt 21688

                                                                         
Query: 626   gtactaaagatgaccaattcactttggattatcatgatccatcaaagagatcaatcccaa 685
             ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 21687 gtactaaagatgaccaattcactttggattatcatgatccatcaaagagatcaatcccaa 21628

                                                                         
Query: 686   acgctttgttagtagaattgaatgatgggactgtcttagatgaagtggtcgtagaatatc 745
             ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 21627 acgctttgttagtagaattgaatgatgggactgtcttagatgaagtggtcgtagaatatc 21568

                                                                         
Query: 746   caatcggtcacagactaagaagaaagg-aggtgtcccactattgatgcagaaattctacc 804
             ||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||
Sbjct: 21567 caatcggtcacagactaagaagaaaggaaggtgtcccactattgatgcagaaattctacc 21508

                                                                         
Query: 805   accatttgcgtgaacattccgccggcgatattgaaaa-gtggaagcttttatggaagc-a 862
             |||||||||||||||||| |||||||||||||||||| ||||||||||| |||||||| |
Sbjct: 21507 accatttgcgtgaacatttcgccggcgatattgaaaaggtggaagctttaatggaagcaa 21448

                                                                         
Query: 863   gttcagnatgacggtttctttaacttaactggtgatgaatttgtcaacatgttctgcgaa 922
             || ||| ||||||||||||| |||||||||| |||||||| ||||||||||| |||||| 
Sbjct: 21447 gtacag-atgacggtttcttaaacttaactgttgatgaatatgtcaacatgtactgcgat 21389

                       
Query: 923   taagctttgt 932
             ||||||||||
Sbjct: 21388 taagctttgt 21379


  Database: Klactis 3X assemblage 11/02
    Posted date:  Nov 27, 2002 12:23 PM
  Number of letters in database: 10,358,551
  Number of sequences in database:  1807
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 5955
Number of Sequences: 1807
Number of extensions: 5955
Number of successful extensions: 38
Number of sequences better than 1.0e-20: 1
length of query: 936
length of database: 10,358,551
effective HSP length: 16
effective length of query: 920
effective length of database: 10,329,639
effective search space: 9503267880
effective search space used: 9503267880
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 50 (99.6 bits)