BLASTN 2.2.3 [May-13-2002] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= FJ0AC29ZB10FM1.SCF screened BAC_end (926 letters) Database: Klactis 3X assemblage 11/02 1807 sequences; 10,358,551 total letters Searching....done Score E Sequences producing significant alignments: (bits) Value 3x_Contig875 1148 0.0 >3x_Contig875 Length = 2795 Score = 1148 bits (579), Expect = 0.0 Identities = 631/642 (98%), Gaps = 5/642 (0%) Strand = Plus / Plus Query: 112 agtcgctggtctgcagtgtgtctgacttctagttttaataatatgcaatggatcattttt 171 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1 agtcgctggtctgcagtgtgtctgacttctagttttaataatatgcaatggatcattttt 60 Query: 172 ttttgttagcttcttagcggtaggaagctgcactgacaatgacattttaccgagagctct 231 ||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| Sbjct: 61 ttttgttagcttcttagcggtaggaagctgcactgacaatgacatcttaccgagagctct 120 Query: 232 tgtgcgacccggaaaaaccttagagataataaaggacagttcagtacttttagagacgct 291 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 121 tgtgcgacccggaaaaaccttagagataataaaggacagttcagtacttttagagacgct 180 Query: 292 accaaaaattttaagcggacgactaatacttagtattaccgcttctgctcttgtgtgtcc 351 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 181 accaaaaattttaagcggacgactaatacttagtattaccgcttctgctcttgtgtgtcc 240 Query: 352 caccttatatatatagagagccgttactatgagaatagtcctgtgatttctttatctcat 411 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 241 caccttatatatatagagagccgttactatgagaatagtcctgtgatttctttatctcat 300 Query: 412 cgcagtagtcgattaaatgtcagactttgaattttgttgattttttaatcagaactaccg 471 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 301 cgcagtagtcgattaaatgtcagactttgaattttgttgattttttaatcagaactaccg 360 Query: 472 aattangtatttacaagcgatatattagaataatgttacatagataatatatacaatgaa 531 ||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 361 aattaggtatttacaagcgatatattagaataatgttacatagataatatatacaatgaa 420 Query: 532 aaatgtatataagtcaaactgtggggtcaagggggtaaggatggataaggcatttt-aaa 590 |||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| Sbjct: 421 aaatgtatataagtcaaactgtggggtcaagggggtaaggatggataaggcattttcaaa 480 Query: 591 aaatatataccattctaagaagacaggcgtgtttaccgtttg-aaataaacggccttgtt 649 |||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| Sbjct: 481 aaatatataccattctaagaagacaggcgtgtttaccgtttgaaaataaacggccttgtt 540 Query: 650 ttccaagatgcaccctgatagaatgtcggaa-aagactcgttcat-aatgtatggattga 707 ||||||||||||||||||||||||| ||||| ||||||||||||| ||||||||||| | Sbjct: 541 ttccaagatgcaccctgatagaatg-cggaataagactcgttcataaatgtatggatagt 599 Query: 708 aaatcgttagatgagaaaagtttgttacatgtaagacatttt 749 |||||||||||||||||| |||||||||||||| |||||||| Sbjct: 600 aaatcgttagatgagaaaggtttgttacatgtaggacatttt 641 Database: Klactis 3X assemblage 11/02 Posted date: Nov 27, 2002 12:23 PM Number of letters in database: 10,358,551 Number of sequences in database: 1807 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 8141 Number of Sequences: 1807 Number of extensions: 8141 Number of successful extensions: 54 Number of sequences better than 1.0e-20: 1 length of query: 926 length of database: 10,358,551 effective HSP length: 16 effective length of query: 910 effective length of database: 10,329,639 effective search space: 9399971490 effective search space used: 9399971490 T: 0 A: 40 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 50 (99.6 bits)