BLASTN 2.2.3 [May-13-2002] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= FJ0AC29ZB12FM1.SCF screened BAC_end (961 letters) Database: Klactis 3X assemblage 11/02 1807 sequences; 10,358,551 total letters Searching....done Score E Sequences producing significant alignments: (bits) Value 3x_Contig1686 1318 0.0 >3x_Contig1686 Length = 15382 Score = 1318 bits (665), Expect = 0.0 Identities = 713/724 (98%), Gaps = 4/724 (0%) Strand = Plus / Minus Query: 86 gaagctaataactctttaaaatcaacttacagattgtacgagaacagtagccctggaaca 145 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1222 gaagctaataactctttaaaatcaacttacagattgtacgagaacagtagccctggaaca 1163 Query: 146 gattgttgtcttgcagctaacatctgtgtcagtagtaaggcaaatactattaattcattc 205 |||||||||||||||||||||| | | ||||||||||||||||||||||||||||||||| Sbjct: 1162 gattgttgtcttgcagctaacaacggggtcagtagtaaggcaaatactattaattcattc 1103 Query: 206 atggtcattaa-ctgggttgcattgctatccgtacatatttagcgtttttccgaatacta 264 |||||||| || |||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1102 atggtcatgaagctgggttgcattgctatccgtacatatttagcgtttttccgaatacta 1043 Query: 265 tcgtaagtagtctctgttgaggaagccttgatttttatgtcaaggctcgaagatgttaaa 324 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1042 tcgtaagtagtctctgttgaggaagccttgatttttatgtcaaggctcgaagatgttaaa 983 Query: 325 aacctggttcagtcacaaagagggtaagattaaagacgaacatacaaaccattagccatt 384 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 982 aacctggttcagtcacaaagagggtaagattaaagacgaacatacaaaccattagccatt 923 Query: 385 ggccagcattgatctattagtactatttactattatgtacaagggtgatattttgttagt 444 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 922 ggccagcattgatctattagtactatttactattatgtacaagggtgatattttgttagt 863 Query: 445 taacatttatttacttttgactttgtttgctagattcttctgaagtttgttttgattgta 504 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 862 taacatttatttacttttgactttgtttgctagattcttctgaagtttgttttgattgta 803 Query: 505 ggtcttcctctcacgtcccgtatgcattttttttttggttcagttccatggcagctttat 564 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 802 ggtcttcctctcacgtcccgtatgcattttttttttggttcagttccatggcagctttat 743 Query: 565 cattttcaggaattatacgggcaccaatagatgttgcatatatgcgtcctattttctttg 624 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 742 cattttcaggaattatacgggcaccaatagatgttgcatatatgcgtcctattttctttg 683 Query: 625 cagcttcaatgaggtcattggtgtacgaatcttctgcaggattctgntaatagatgtcat 684 |||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| Sbjct: 682 cagcttcaatgaggtcattggtgtacgaatcttctgcaggattctgtaaatagatgtcat 623 Query: 685 cgaaattctcttcctccagttgattctttcgttcgcactcttcataatatctttctgctg 744 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 622 cgaaattctcttcctccagttgattctttcgttcgcactcttcataatatctttctgctg 563 Query: 745 gttcaggtatatcccagttcaggtcttttagctttcttcaatcattcttgaattgacgga 804 ||||||||||||||||||||| |||||||||| ||||||||||| ||||||| ||||||| Sbjct: 562 gttcaggtatatcccagttca-gtcttttagc-ttcttcaatca-tcttgaaatgacgga 506 Query: 805 gtgg 808 |||| Sbjct: 505 gtgg 502 Database: Klactis 3X assemblage 11/02 Posted date: Nov 27, 2002 12:23 PM Number of letters in database: 10,358,551 Number of sequences in database: 1807 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 8270 Number of Sequences: 1807 Number of extensions: 8270 Number of successful extensions: 45 Number of sequences better than 1.0e-20: 1 length of query: 961 length of database: 10,358,551 effective HSP length: 16 effective length of query: 945 effective length of database: 10,329,639 effective search space: 9761508855 effective search space used: 9761508855 T: 0 A: 40 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 51 (101.6 bits)