BLASTN 2.2.3 [May-13-2002] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= FJ0AC29ZC05RM1.SCF screened BAC_end (920 letters) Database: Klactis 3X assemblage 11/02 1807 sequences; 10,358,551 total letters Searching....done Score E Sequences producing significant alignments: (bits) Value 3x_Contig1724 1316 0.0 >3x_Contig1724 Length = 20938 Score = 1316 bits (664), Expect = 0.0 Identities = 721/736 (97%), Gaps = 3/736 (0%) Strand = Plus / Minus Query: 46 atatttgaccttcgaatcagaatgttgtaaaagttgcattattatcaatttgtctttacc 105 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 17264 atatttgaccttcgaatcagaatgttgtaaaagttgcattattatcaatttgtctttacc 17205 Query: 106 aagtattttgatagaatcattatccaattccatgactttgcggatgtcattcaacaaaat 165 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 17204 aagtattttgatagaatcattatccaattccatgactttgcggatgtcattcaacaaaat 17145 Query: 166 ttgaagactgaccgaagaaggcctcttctcggtgataaattccttcaataaatctatcaa 225 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 17144 ttgaagactgaccgaagaaggcctcttctcggtgataaattccttcaataaatctatcaa 17085 Query: 226 ttgcaagaatagtttccagttattttctttgaatttatccaaattgtccaaccagaattg 285 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 17084 ttgcaagaatagtttccagttattttctttgaatttatccaaattgtccaaccagaattg 17025 Query: 286 atcgtcttgatgaacaggagaccataataaaatcttggagttcaactccgccaaatattc 345 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 17024 atcgtcttgatgaacaggagaccataataaaatcttggagttcaactccgccaaatattc 16965 Query: 346 gtcgaatgatgttaattcatggtactctgcttccaaagattctttcaaagtagttaaatc 405 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 16964 gtcgaatgatgttaattcatggtactctgcttccaaagattctttcaaagtagttaaatc 16905 Query: 406 ttgtttcaattcatcgtccaaaaactttctctccattatctggttcaaagtagggatggc 465 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 16904 ttgtttcaattcatcgtccaaaaactttctctccattatctggttcaaagtagggatggc 16845 Query: 466 atttcctagcaaaattaaattcttaactgtggatttatgatttttcactgattcattgat 525 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 16844 atttcctagcaaaattaaattcttaactgtggatttatgatttttcactgattcattgat 16785 Query: 526 accatttagaatgattgcaactgaaagtctgacgactttttccttaattgtagatctaat 585 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 16784 accatttagaatgattgcaactgaaagtctgacgactttttccttaattgtagatctaat 16725 Query: 586 caacctttatagttgtaaatagtgtgctagatgttccttagtgaacgcttcagttatctt 645 ||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 16724 caaccttaatagttgtaaatagtgtgctagatgttccttagtgaacgcttcagttatctt 16665 Query: 646 agggatcgaaggtcaattacccgataatcattaacgcgtagtattgtagttgaattggaa 705 | ||||||||||||||| ||| |||||||||||||||||||||||||||||||||| | | Sbjct: 16664 a-ggatcgaaggtcaataaccagataatcattaacgcgtagtattgtagttgaatttgta 16606 Query: 706 aattgtttgaattcctttgttgaggttgatttttctttgat-gaaaagattgatttggaa 764 ||||||||| |||| |||||||||||||| ||||| ||||| ||||||||||||| | || Sbjct: 16605 aattgtttgtattcgtttgttgaggttga-ttttcattgatagaaaagattgattggaaa 16547 Query: 765 actttcggcaattaaa 780 ||| ||||||| |||| Sbjct: 16546 actatcggcaaataaa 16531 Database: Klactis 3X assemblage 11/02 Posted date: Nov 27, 2002 12:23 PM Number of letters in database: 10,358,551 Number of sequences in database: 1807 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 11,323 Number of Sequences: 1807 Number of extensions: 11323 Number of successful extensions: 124 Number of sequences better than 1.0e-20: 1 length of query: 920 length of database: 10,358,551 effective HSP length: 16 effective length of query: 904 effective length of database: 10,329,639 effective search space: 9337993656 effective search space used: 9337993656 T: 0 A: 40 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 50 (99.6 bits)