BLASTN 2.2.3 [May-13-2002] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= FJ0AC29ZC07RM1.SCF screened BAC_end (948 letters) Database: Klactis 3X assemblage 11/02 1807 sequences; 10,358,551 total letters Searching....done Score E Sequences producing significant alignments: (bits) Value 3x_Contig1757 1360 0.0 >3x_Contig1757 Length = 24754 Score = 1360 bits (686), Expect = 0.0 Identities = 862/901 (95%), Gaps = 19/901 (2%) Strand = Plus / Minus Query: 49 cttcaattcagtggcttgtttaaggttcatatcctctagttctttggcataattgagctg 108 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10756 cttcaattcagtggcttgtttaaggttcatatcctctagttctttggcataattgagctg 10697 Query: 109 ctccttcagagtcttgttcaagacagccaaatcttgtaattcttccgtagaattgttcct 168 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10696 ctccttcagagtcttgttcaagacagccaaatcttgtaattcttccgtagaattgttcct 10637 Query: 169 atgagacgcagaagtttgaactgatcgtagttcagatatcagattttctttttccttcag 228 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10636 atgagacgcagaagtttgaactgatcgtagttcagatatcagattttctttttccttcag 10577 Query: 229 ttcttgttgtaaatatcgtatctcttccacatgtttgtttatctgagtttcatgttgatg 288 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10576 ttcttgttgtaaatatcgtatctcttccacatgtttgtttatctgagtttcatgttgatg 10517 Query: 289 cagaatgtttccgctaccttcaatttccaacttcatcgattcaattgcattcgtaacttc 348 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10516 cagaatgtttccgctaccttcaatttccaacttcatcgattcaattgcattcgtaacttc 10457 Query: 349 attttgttttgaggaaagcttatgagctaattccacgatacgctgctctttcaaattaac 408 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10456 attttgttttgaggaaagcttatgagctaattccacgatacgctgctctttcaaattaac 10397 Query: 409 ttcgtttttcaaacttacaacctgtgttcgaagtgtcgttatgatcttctcatcctcctt 468 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10396 ttcgtttttcaaacttacaacctgtgttcgaagtgtcgttatgatcttctcatcctcctt 10337 Query: 469 cggtaacgcatccttacttttcaattcttccttcaacttgatgttntcctcatatagtat 528 ||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| Sbjct: 10336 cggtaacgcatccttacttttcaattcttccttcaacttgatgttttcctcatatagtat 10277 Query: 529 cttggtatctttcaaagcattttccagttcgttcatactcttatcgtatttgttctgaag 588 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10276 cttggtatctttcaaagcattttccagttcgttcatactcttatcgtatttgttctgaag 10217 Query: 589 cgaataagtctcgcgttctgatgacaacttcganatttcatactcgttctgtaaggttgt 648 ||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||| Sbjct: 10216 cgaataagtctcgcgttctgatgacaacttcgaaatttcatactcgttctgtaaggttgt 10157 Query: 649 gtatttgtactgaagcgttaaaacgcgacgtctcaactgatctgcatctagcgattcaag 708 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10156 gtatttgtactgaagcgttaaaacgcgacgtctcaactgatctgcatctagcgattcaa- 10098 Query: 709 gggggcttttccttttatctgagggtggttagtgacatattaatacacaaattgagtttg 768 ||||||||||| ||||||||||| |||||||||||| |||||||| |||||||||| Sbjct: 10097 -ggggcttttcc-tttatctgagg--tgttagtgacata-taatacac-aattgagttt- 10045 Query: 769 gacacaattggccagacactatttggcatgaaaccattcctttagtttccccttaagat- 827 ||||||||| || |||||||| |||||||| || ||||| || |||| ||| |||||| Sbjct: 10044 gacacaatt-gcaagacacta-ttggcatg-aagcattctttaagtt--cccctaagatc 9990 Query: 828 acttaaatggattcaggaccaaggtcagaatttttgctttaaaatttttaaatccgaatg 887 |||| |||||| ||| || ||| |||| ||||| ||| ||||||| | ||||| |||| Sbjct: 9989 actt-aatgga-tcaagatcaaagtcaagattttcgctataaaattataaaatcagaat- 9933 Query: 888 gaattggagaaacgtttaaatcattcccctttaaagatgatcaagaaagggggacgggga 947 ||| || |||||||||||||||| |||||||||||||||||||||||| ||||||||||| Sbjct: 9932 gaaatgaagaaacgtttaaatca-tcccctttaaagatgatcaagaaa-ggggacgggga 9875 Query: 948 t 948 | Sbjct: 9874 t 9874 Database: Klactis 3X assemblage 11/02 Posted date: Nov 27, 2002 12:23 PM Number of letters in database: 10,358,551 Number of sequences in database: 1807 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 7767 Number of Sequences: 1807 Number of extensions: 7767 Number of successful extensions: 55 Number of sequences better than 1.0e-20: 1 length of query: 948 length of database: 10,358,551 effective HSP length: 16 effective length of query: 932 effective length of database: 10,329,639 effective search space: 9627223548 effective search space used: 9627223548 T: 0 A: 40 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 50 (99.6 bits)