BLASTN 2.2.3 [May-13-2002] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= FJ0AC29ZC09RM1.SCF screened BAC_end (873 letters) Database: Klactis 3X assemblage 11/02 1807 sequences; 10,358,551 total letters Searching....done Score E Sequences producing significant alignments: (bits) Value 3x_Contig1704 1076 0.0 >3x_Contig1704 Length = 14855 Score = 1076 bits (543), Expect = 0.0 Identities = 608/623 (97%), Gaps = 5/623 (0%) Strand = Plus / Plus Query: 49 tcattgacattgtcactattctt-aacatgagtaccaaa-caaggctggaaagccaactt 106 ||||||||||||||||||||||| ||||||||||||||| |||||||||||||||||||| Sbjct: 8506 tcattgacattgtcactattcttcaacatgagtaccaaaacaaggctggaaagccaactt 8565 Query: 107 gggcagaatttcaggttacgagatcacccaagatcattgtcattactatatgaaaaagct 166 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 8566 gggcagaatttcaggttacgagatcacccaagatcattgtcattactatatgaaaaagct 8625 Query: 167 ttctctgatatgggaacagagatatatgattcttttatacccgaaactattgctactgaa 226 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 8626 ttctctgatatgggaacagagatatatgattcttttatacccgaaactattgctactgaa 8685 Query: 227 tccgttgaaatgtcagaatgtaatatgaatttggcaactattcattcagagtttgggaaa 286 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 8686 tccgttgaaatgtcagaatgtaatatgaatttggcaactattcattcagagtttgggaaa 8745 Query: 287 aaatggtctcatctctcattcaatgtggtagagattgacatttgccagctcactggtgat 346 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 8746 aaatggtctcatctctcattcaatgtggtagagattgacatttgccagctcactggtgat 8805 Query: 347 ctattaattactagattcgatacagtacgcaacaaacaccttcatttacgtttacctttg 406 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 8806 ctattaattactagattcgatacagtacgcaacaaacaccttcatttacgtttacctttg 8865 Query: 407 aatcgtcataattccagagacctttcggaagaggtcttgggttttgaagccgccctcgat 466 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 8866 aatcgtcataattccagagacctttcggaagaggtcttgggttttgaagccgccctcgat 8925 Query: 467 gagttaaaccatatcatttctttcaacatttgtaccacttcatttgaagttaccttcgtc 526 |||||||||||||||||||||| ||||| ||||||||||||| |||||||||||| ||| Sbjct: 8926 gagttaaaccatatcatttcttccaacaattgtaccacttcaattgaagttacctcggtc 8985 Query: 527 attaccaccaaag-acaaaagaag-actggtgggatgaaaggtatgctttgaacaatcga 584 ||||||||||||| ||||| |||| ||||||||||||||||||||||||||||||||||| Sbjct: 8986 attaccaccaaagaacaaaggaagaactggtgggatgaaaggtatgctttgaacaatcga 9045 Query: 585 cttcaaactcttctcactaaaattgaggattcatgggtttgtgggttcaaaagagttttt 644 || ||||||||||||||||||||||||||||||||| |||||||||||||| |||||||| Sbjct: 9046 ctccaaactcttctcactaaaattgaggattcatggttttgtgggttcaaaggagttttt 9105 Query: 645 tacccaag-atagttgatcagca 666 ||||||| |||||||||||||| Sbjct: 9106 aacccaagaatagttgatcagca 9128 Database: Klactis 3X assemblage 11/02 Posted date: Nov 27, 2002 12:23 PM Number of letters in database: 10,358,551 Number of sequences in database: 1807 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 12,687 Number of Sequences: 1807 Number of extensions: 12687 Number of successful extensions: 59 Number of sequences better than 1.0e-20: 1 length of query: 873 length of database: 10,358,551 effective HSP length: 16 effective length of query: 857 effective length of database: 10,329,639 effective search space: 8852500623 effective search space used: 8852500623 T: 0 A: 40 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 50 (99.6 bits)