BLASTN 2.2.3 [May-13-2002]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= FJ0AC29ZC11RM1.SCF screened BAC_end
         (945 letters)

Database: Klactis 3X assemblage 11/02 
           1807 sequences; 10,358,551 total letters

Searching....done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

3x_Contig1485                                                        1461   0.0  

>3x_Contig1485 
          Length = 9830

 Score = 1461 bits (737), Expect = 0.0
 Identities = 774/784 (98%), Gaps = 2/784 (0%)
 Strand = Plus / Plus

                                                                        
Query: 44   gcttctacttgatatataccctattaatgtgccacaaattaccataaatgaggatgaagt 103
            |||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||
Sbjct: 8204 gcttctacttgatatataccctatcaatgtgccacaaattaccataaatgaggatgaagt 8263

                                                                        
Query: 104  gaatgagacatggaatcaagaactagaagcgttaaaaagcatttatgagtctaacttcga 163
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 8264 gaatgagacatggaatcaagaactagaagcgttaaaaagcatttatgagtctaacttcga 8323

                                                                        
Query: 164  acaactcaacgctagttcttacaagatcaatctcaacgatgagttcaaaatcaatctgaa 223
            |||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||
Sbjct: 8324 acaactcaacgctagttcttacaagatcaatctcaacgatgagttcaaaatcaaactgaa 8383

                                                                        
Query: 224  ggtctacaagacaaagtcctacccacaaactcttcctggtattgtcgtgtccacattcga 283
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 8384 ggtctacaagacaaagtcctacccacaaactcttcctggtattgtcgtgtccacattcga 8443

                                                                        
Query: 284  caaatcatacaagcttccaaattacataaagctaacaattctagaaaagcttttacattt 343
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 8444 caaatcatacaagcttccaaattacataaagctaacaattctagaaaagcttttacattt 8503

                                                                        
Query: 344  tcttgaagagtctcaactaattggtgacatgtgcgtttaccatattgtcgattggctcca 403
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 8504 tcttgaagagtctcaactaattggtgacatgtgcgtttaccatattgtcgattggctcca 8563

                                                                        
Query: 404  gcaaaatttatctgagattatcgaaaatcctggtccgttactaacaaaagaacgcattga 463
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 8564 gcaaaatttatctgagattatcgaaaatcctggtccgttactaacaaaagaacgcattga 8623

                                                                        
Query: 464  aatcacttctaataatttgatcaaaagcactaataaaaaaagaagattcaatgccagaac 523
            |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct: 8624 aatcacttctaataatttgatcaaaagcactaataaaaaaagaagattcaatgccagagc 8683

                                                                        
Query: 524  ctctaaattgtcgaatcaagagg-tttcagagttggaagatgaatatagaaagaggcaga 582
            ||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||
Sbjct: 8684 ctctaaattgtcgaatcaagaggttttcagagttggaagatgaatatagaaagaggcaga 8743

                                                                        
Query: 583  aaagtaatgaattccatactatgagggaacagcgctcaaagctaccggcttggaaaatac 642
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 8744 aaagtaatgaattccatactatgagggaacagcgctcaaagctaccggcttggaaaatac 8803

                                                                        
Query: 643  agaattctatcgtagagcttataaattctaatgatgttgttcttattacaggtgaaactg 702
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 8804 agaattctatcgtagagcttataaattctaatgatgttgttcttattacaggtgaaactg 8863

                                                                        
Query: 703  gttcgggntaattaacacaggtcgttcaatttgtccttgataatttaatgcaacatggcg 762
            |||||||  ||| |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 8864 gttcgggtaaatcaacacaggtcgttcaatttgtccttgataatttaatgcaacatggcg 8923

                                                                        
Query: 763  atttgaacaagacgtccataatttg-acacagccaagaaagatatctgcaattggtctag 821
            |||||||||||||||||||||| || ||||||||||||| ||||||||||||||||||||
Sbjct: 8924 atttgaacaagacgtccataatctgcacacagccaagaaggatatctgcaattggtctag 8983

                
Query: 822  cgga 825
            ||||
Sbjct: 8984 cgga 8987


  Database: Klactis 3X assemblage 11/02
    Posted date:  Nov 27, 2002 12:23 PM
  Number of letters in database: 10,358,551
  Number of sequences in database:  1807
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 7464
Number of Sequences: 1807
Number of extensions: 7464
Number of successful extensions: 52
Number of sequences better than 1.0e-20: 1
length of query: 945
length of database: 10,358,551
effective HSP length: 16
effective length of query: 929
effective length of database: 10,329,639
effective search space: 9596234631
effective search space used: 9596234631
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 50 (99.6 bits)