BLASTN 2.2.3 [May-13-2002]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= FJ0AC29ZD03RM1.SCF screened BAC_end
         (920 letters)

Database: Klactis 3X assemblage 11/02 
           1807 sequences; 10,358,551 total letters

Searching....done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

3x_Contig1709                                                        1439   0.0  

>3x_Contig1709 
          Length = 16948

 Score = 1439 bits (726), Expect = 0.0
 Identities = 808/825 (97%), Gaps = 8/825 (0%)
 Strand = Plus / Minus

                                                                         
Query: 49    cggtacatcaatatcaggtatggtacggtgaatggtacccaaagtattttcccctgcatc 108
             ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 14831 cggtacatcaatatcaggtatggtacggtgaatggtacccaaagtattttcccctgcatc 14772

                                                                         
Query: 109   gagaaggatagaacggttcacaacagtgccatcgacttcagtatacggtatcttcactaa 168
             ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 14771 gagaaggatagaacggttcacaacagtgccatcgacttcagtatacggtatcttcactaa 14712

                                                                         
Query: 169   tgttgaaataacattacggtacttagatggcaatgcactaccagttccaatggaaattat 228
             |||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct: 14711 tgttgaaataacattacggtacttagatggcaatgcactaccagttccaagggaaattat 14652

                                                                         
Query: 229   ttcaatttcattcaatttagttttattatcaaagttattgacgtgtacttgttcatgtac 288
             ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 14651 ttcaatttcattcaatttagttttattatcaaagttattgacgtgtacttgttcatgtac 14592

                                                                         
Query: 289   ggtgcgttctaaagacgaaccttcaatgcataatggaaccacatgagactcatacaattc 348
             ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 14591 ggtgcgttctaaagacgaaccttcaatgcataatggaaccacatgagactcatacaattc 14532

                                                                         
Query: 349   atcaatcgttgagctctgcttggctgtgggcaactgagattcatgtatgaccatattttc 408
             ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 14531 atcaatcgttgagctctgcttggctgtgggcaactgagattcatgtatgaccatattttc 14472

                                                                         
Query: 409   tttaccaacagtgaaaggttccaaggctattcctttcatcttctcaaagacatgcatatt 468
             ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 14471 tttaccaacagtgaaaggttccaaggctattcctttcatcttctcaaagacatgcatatt 14412

                                                                         
Query: 469   ctcgtttttcaccaaacatgatggcacatgttcttgttgttgaactaatgatgatccttc 528
             ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 14411 ctcgtttttcaccaaacatgatggcacatgttcttgttgttgaactaatgatgatccttc 14352

                                                                         
Query: 529   tggtaggtcttttgggaagcagtggaaaaactcccgggagtaaactctatcggtaatggg 588
             ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 14351 tggtaggtcttttgggaagcagtggaaaaactcccgggagtaaactctatcggtaatggg 14292

                                                                         
Query: 589   aatgttataactttctacttgcaatgctttcaactttaaagttgcaattgctgcgctttc 648
             ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 14291 aatgttataactttctacttgcaatgctttcaactttaaagttgcaattgctgcgctttc 14232

                                                                         
Query: 649   gtatgctatggtgtttggagaaa-tgangaatgagatacataatgctggatttgatcatc 707
             ||||||||||||||||||||||| ||| ||||||||||||||||||||||||||||||||
Sbjct: 14231 gtatgctatggtgtttggagaaattgaggaatgagatacataatgctggatttgatcatc 14172

                                                                         
Query: 708   gctgaacgtat-aaaaaattggaataaatcattggtgatggtaacctcatcgccaaggaa 766
             ||||||||||| |||||||||||||||||||| |||||||||||||||||||||||||||
Sbjct: 14171 gctgaacgtatcaaaaaattggaataaatcatcggtgatggtaacctcatcgccaaggaa 14112

                                                                         
Query: 767   gtagtagatagcttgac-attgatccgtaggatattttttaaatt-atcattgaatcgag 824
             |||||||||||| |||| |||||||||||||||| |||||||||| |||| |||||||||
Sbjct: 14111 gtagtagatagc-tgacaattgatccgtaggataatttttaaattcatcaatgaatcgag 14053

                                                          
Query: 825   gatggtttttg-ttgatggaat-ttcaagacc-aaactttcccaa 866
             ||  || |||| |||||||||| | ||||||| ||||||||||||
Sbjct: 14052 gaatgtatttgtttgatggaatatccaagaccaaaactttcccaa 14008


  Database: Klactis 3X assemblage 11/02
    Posted date:  Nov 27, 2002 12:23 PM
  Number of letters in database: 10,358,551
  Number of sequences in database:  1807
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 7575
Number of Sequences: 1807
Number of extensions: 7575
Number of successful extensions: 40
Number of sequences better than 1.0e-20: 1
length of query: 920
length of database: 10,358,551
effective HSP length: 16
effective length of query: 904
effective length of database: 10,329,639
effective search space: 9337993656
effective search space used: 9337993656
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 50 (99.6 bits)