BLASTN 2.2.3 [May-13-2002] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= FJ0AC29ZD05RM1.SCF screened BAC_end (902 letters) Database: Klactis 3X assemblage 11/02 1807 sequences; 10,358,551 total letters Searching....done Score E Sequences producing significant alignments: (bits) Value 3x_Contig604 1243 0.0 >3x_Contig604 Length = 2699 Score = 1243 bits (627), Expect = 0.0 Identities = 638/641 (99%), Gaps = 1/641 (0%) Strand = Plus / Plus Query: 46 aaattttgcttagcagtacctagaaacgcatgtccattcaataactcttcaaacttggca 105 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1419 aaattttgcttagcagtacctagaaacgcatgtccattcaataactcttcaaacttggca 1478 Query: 106 tcaatttcttgttctgacggtagctgagtgtctgctaaacacattttatccgttttagaa 165 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1479 tcaatttcttgttctgacggtagctgagtgtctgctaaacacattttatccgttttagaa 1538 Query: 166 acatgtcgcgtagaatcaacgttcggagttgaaaagttgtgtgatttcatgtatcgcagg 225 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1539 acatgtcgcgtagaatcaacgttcggagttgaaaagttgtgtgatttcatgtatcgcagg 1598 Query: 226 gtctgggagcgaggtttgagccctgttcctactagattcagcccttgtattaccagatca 285 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1599 gtctgggagcgaggtttgagccctgttcctactagattcagcccttgtattaccagatca 1658 Query: 286 tcgttggaatcattgctagaaaacctggtcttggcatttgcagtcggagcattaatggat 345 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1659 tcgttggaatcattgctagaaaacctggtcttggcatttgcagtcggagcattaatggat 1718 Query: 346 ccagatcgaagcggaaacaaaatactaatggatttttcattcttatcaacagtcattggt 405 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1719 ccagatcgaagcggaaacaaaatactaatggatttttcattcttatcaacagtcattggt 1778 Query: 406 cggtcaaagtttgttgattttcagttgcagaattatagccagaaaagtgatttgatactc 465 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1779 cggtcaaagtttgttgattttcagttgcagaattatagccagaaaagtgatttgatactc 1838 Query: 466 atcaatacaaggaaaacgcgatcattcaataatgatctgggagatagcgaaataatttca 525 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1839 atcaatacaaggaaaacgcgatcattcaataatgatctgggagatagcgaaataatttca 1898 Query: 526 ctagataaacgcttgtacaaaaaacaatttgtcaaagaaaacgattaattctaatgatta 585 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1899 ctagataaacgcttgtacaaaaaacaatttgtcaaagaaaacgattaattctaatgatta 1958 Query: 586 gcanagctgattgtagaacagttttagactctcttc-agtgtacgtatttatggatttcc 644 ||| |||||||||||||||||||||||||||||||| ||||||||||||||||||||||| Sbjct: 1959 gcaaagctgattgtagaacagttttagactctcttcaagtgtacgtatttatggatttcc 2018 Query: 645 tttgtgttacanaacatgtgtactaaatttcatacgctttt 685 ||||||||||| ||||||||||||||||||||||||||||| Sbjct: 2019 tttgtgttacaaaacatgtgtactaaatttcatacgctttt 2059 Database: Klactis 3X assemblage 11/02 Posted date: Nov 27, 2002 12:23 PM Number of letters in database: 10,358,551 Number of sequences in database: 1807 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 6882 Number of Sequences: 1807 Number of extensions: 6882 Number of successful extensions: 41 Number of sequences better than 1.0e-20: 1 length of query: 902 length of database: 10,358,551 effective HSP length: 16 effective length of query: 886 effective length of database: 10,329,639 effective search space: 9152060154 effective search space used: 9152060154 T: 0 A: 40 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 50 (99.6 bits)