BLASTN 2.2.3 [May-13-2002] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= FJ0AC29ZD06RM1.SCF screened BAC_end (973 letters) Database: Klactis 3X assemblage 11/02 1807 sequences; 10,358,551 total letters Searching....done Score E Sequences producing significant alignments: (bits) Value 3x_Contig1792 1372 0.0 >3x_Contig1792 Length = 28468 Score = 1372 bits (692), Expect = 0.0 Identities = 750/765 (98%), Gaps = 5/765 (0%) Strand = Plus / Minus Query: 48 ttaatttatctttttgtaatatttccactaatcactgattaaataataatttgtctatta 107 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 14373 ttaatttatctttttgtaatatttccactaatcactgattaaataataatttgtctatta 14314 Query: 108 aatttcaagcttaccgaattacaaccaaacactaaggaatcgtggtccagtcgagtctgg 167 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 14313 aatttcaagcttaccgaattacaaccaaacactaaggaatcgtggtccagtcgagtctgg 14254 Query: 168 gtatcccacagaaaggattcattccatagttgctgtgtgggaattgatgtttatagatat 227 |||||||||||||||||||||||||||||||||||||||||||||||||| || |||||| Sbjct: 14253 gtatcccacagaaaggattcattccatagttgctgtgtgggaattgatgtctagagatat 14194 Query: 228 gagaagggcttcgcaacatttgaggttgattggcaaccatttacatgctagaaactacca 287 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 14193 gagaagggcttcgcaacatttgaggttgattggcaaccatttacatgctagaaactacca 14134 Query: 288 caacgttttggttggaagcaaatactcatcgtcttttaaacagtacttgcagctgccaaa 347 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 14133 caacgttttggttggaagcaaatactcatcgtcttttaaacagtacttgcagctgccaaa 14074 Query: 348 cggtgaaattgggtcctatttccacgatgtgccattagacttagatgttgatgccaaaac 407 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 14073 cggtgaaattgggtcctatttccacgatgtgccattagacttagatgttgatgccaaaac 14014 Query: 408 atgtaacatgatcgtagaggttccacgttggagtaatgggaagtttgaaatcagtaagac 467 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 14013 atgtaacatgatcgtagaggttccacgttggagtaatgggaagtttgaaatcagtaagac 13954 Query: 468 cgaaccatttaaccccatcacacaggacataaagaaaggcaagccacgatttgtcaataa 527 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 13953 cgaaccatttaaccccatcacacaggacataaagaaaggcaagccacgatttgtcaataa 13894 Query: 528 cattttcccttaccatggatacattcataactatggggctatcccacagacatgggaaca 587 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 13893 cattttcccttaccatggatacattcataactatggggctatcccacagacatgggaaca 13834 Query: 588 gccacttattgaagtattgcccggtttcaagggtgataatgacccattggactgttgtga 647 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 13833 gccacttattgaagtattgcccggtttcaagggtgataatgacccattggactgttgtga 13774 Query: 648 aattggttccagcatcgcc-aaatgggagatatcaaaaaagtaaagcttctanggtcatt 706 ||||||||||||||||||| |||||||||||||||||||||||||||||||| ||||||| Sbjct: 13773 aattggttccagcatcgccaaaatgggagatatcaaaaaagtaaagcttctagggtcatt 13714 Query: 707 agccctcattgacgatgggagactcgattggnaagtcatttgtatcgacatttgaaaatc 766 |||||||||||||||||| |||||||||| |||||||||||||||||| ||||| ||| Sbjct: 13713 agccctcattgacgatggagaactcgattggaaagtcatttgtatcgaca-ttgaagatc 13655 Query: 767 ccattgcttattaaattgaacaagtttggccagatgtagacactg 811 ||||||| ||| |||||||||||||| | ||||||||||||||| Sbjct: 13654 ccattgc-tataaaattgaacaagtt--ggcagatgtagacactg 13613 Database: Klactis 3X assemblage 11/02 Posted date: Nov 27, 2002 12:23 PM Number of letters in database: 10,358,551 Number of sequences in database: 1807 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 6219 Number of Sequences: 1807 Number of extensions: 6219 Number of successful extensions: 40 Number of sequences better than 1.0e-20: 1 length of query: 973 length of database: 10,358,551 effective HSP length: 16 effective length of query: 957 effective length of database: 10,329,639 effective search space: 9885464523 effective search space used: 9885464523 T: 0 A: 40 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 51 (101.6 bits)