BLASTN 2.2.3 [May-13-2002] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= FJ0AC29ZD07RM1.SCF screened BAC_end (905 letters) Database: Klactis 3X assemblage 11/02 1807 sequences; 10,358,551 total letters Searching....done Score E Sequences producing significant alignments: (bits) Value 3x_Contig1768 1292 0.0 >3x_Contig1768 Length = 25668 Score = 1292 bits (652), Expect = 0.0 Identities = 687/697 (98%), Gaps = 3/697 (0%) Strand = Plus / Plus Query: 47 taaggttagcgagtctttgcaccttccgtgtgtttttccgtatgtgcctgaatctatatg 106 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 3846 taaggttagcgagtctttgcaccttccgtgtgtttttccgtatgtgcctgaatctatatg 3905 Query: 107 caggaaactccacgaatttaatgtactagtaacgactaataatgacagacattcttatat 166 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 3906 caggaaactccacgaatttaatgtactagtaacgactaataatgacagacattcttatat 3965 Query: 167 acatacatacgacgcatatagaggaacgttcttggaagaatattatacaatcactgtata 226 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 3966 acatacatacgacgcatatagaggaacgttcttggaagaatattatacaatcactgtata 4025 Query: 227 gtgtgataaaccaacacataggaaaaaataagactgaccattaaaagtggagcagttttg 286 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 4026 gtgtgataaaccaacacataggaaaaaataagactgaccattaaaagtggagcagttttg 4085 Query: 287 gggacggaaatatcctacgatagcatacttatctccagcttcgtctgtctgactaattat 346 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 4086 gggacggaaatatcctacgatagcatacttatctccagcttcgtctgtctgactaattat 4145 Query: 347 gccttatctacgacttttttgcctttatattcctcatcaacatgaaaaactgcaacattt 406 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 4146 gccttatctacgacttttttgcctttatattcctcatcaacatgaaaaactgcaacattt 4205 Query: 407 aaaaggatgcaatcctgggtaataaatgaatgctgcaaaaataatgtgaagttgcaatcc 466 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 4206 aaaaggatgcaatcctgggtaataaatgaatgctgcaaaaataatgtgaagttgcaatcc 4265 Query: 467 cgaagctcttgcatgtagtaacgttgtgagaacagtggatctgtatgttgtgagcagtgg 526 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 4266 cgaagctcttgcatgtagtaacgttgtgagaacagtggatctgtatgttgtgagcagtgg 4325 Query: 527 tagtgatcttcggtttaacaagcaattgagtacctaattatacatggagagtcagactgg 586 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 4326 tagtgatcttcggtttaacaagcaattgagtacctaattatacatggagagtcagactgg 4385 Query: 587 tggaagtaggggtgggagcataacggaatgggatcgntaaccctggttgaaagcagtgac 646 |||||||||||||||||||||||||||||||||||| ||||||||||||| |||||| Sbjct: 4386 tggaagtaggggtgggagcataacggaatgggatcgtaaaccctggttgaagcaagtgac 4445 Query: 647 actaagatccacantaatcgggttgataataggttctcttgtactagtgtctaacttt-a 705 ||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| | Sbjct: 4446 actaagatccacaataatcgggttgataataggttctcttgtactagtgtctaactttca 4505 Query: 706 gtttggattacagacagggttggggtttttatgatgt 742 |||||||||||||||||||| |||||| |||||||| Sbjct: 4506 gtttggattacagacagggt--gggtttctatgatgt 4540 Database: Klactis 3X assemblage 11/02 Posted date: Nov 27, 2002 12:23 PM Number of letters in database: 10,358,551 Number of sequences in database: 1807 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 5107 Number of Sequences: 1807 Number of extensions: 5107 Number of successful extensions: 25 Number of sequences better than 1.0e-20: 1 length of query: 905 length of database: 10,358,551 effective HSP length: 16 effective length of query: 889 effective length of database: 10,329,639 effective search space: 9183049071 effective search space used: 9183049071 T: 0 A: 40 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 50 (99.6 bits)