BLASTN 2.2.3 [May-13-2002] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= FJ0AC29ZD10FM1.SCF screened BAC_end (892 letters) Database: Klactis 3X assemblage 11/02 1807 sequences; 10,358,551 total letters Searching....done Score E Sequences producing significant alignments: (bits) Value 3x_Contig1581 1342 0.0 >3x_Contig1581 Length = 11429 Score = 1342 bits (677), Expect = 0.0 Identities = 730/745 (97%), Gaps = 2/745 (0%) Strand = Plus / Minus Query: 85 taacagaatgcaccaaggaaactggaatcaaagatgtggatttatgagaggtaatatgcc 144 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 6000 taacagaatgcaccaaggaaactggaatcaaagatgtggatttatgagaggtaatatgcc 5941 Query: 145 ctacaaattggaaaatacccattgggaaagttgtataccatatgactttagatggtacca 204 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 5940 ctacaaattggaaaatacccattgggaaagttgtataccatatgactttagatggtacca 5881 Query: 205 ggaaagtgtttaatatgcatctcgaaaatgatccattcaaataagtgggtagaattcctt 264 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 5880 ggaaagtgtttaatatgcatctcgaaaatgatccattcaaataagtgggtagaattcctt 5821 Query: 265 ccgggaagtttagaactgtattcttcaattttgatgaagatacctgtggtgcatgcaaat 324 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 5820 ccgggaagtttagaactgtattcttcaattttgatgaagatacctgtggtgcatgcaaat 5761 Query: 325 agttagcaaacgttacaaacgcgagacatagcgatgcgcttagaaggaactgcaattccg 384 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 5760 agttagcaaacgttacaaacgcgagacatagcgatgcgcttagaaggaactgcaattccg 5701 Query: 385 ttaaaccaacaggatgtggaaatcgggataaaatggcttttgacaggtttgatgaaacag 444 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 5700 ttaaaccaacaggatgtggaaatcgggataaaatggcttttgacaggtttgatgaaacag 5641 Query: 445 aagaagtcatataccatataaggcataaaatagatatgtgaacattcacttccggtaaat 504 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 5640 aagaagtcatataccatataaggcataaaatagatatgtgaacattcacttccggtaaat 5581 Query: 505 actcttgtacatccttgggaaatagattgacaaattgctctttccacgtctgattttgca 564 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 5580 actcttgtacatccttgggaaatagattgacaaattgctctttccacgtctgattttgca 5521 Query: 565 gtcttctgacctcattgaacgaagttgaatgtttatgagacctgtaattttcctggaacg 624 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 5520 gtcttctgacctcattgaacgaagttgaatgtttatgagacctgtaattttcctggaacg 5461 Query: 625 gtatttgtacctggttgacaaagttaacattctg-aaatgttttattgatcgaaggacgg 683 ||||||||||||||||||||||||||||| |||| ||||||||||||||||||||||||| Sbjct: 5460 gtatttgtacctggttgacaaagttaaca-tctgaaaatgttttattgatcgaaggacgg 5402 Query: 684 cgcttcgaagtgacgctcttggaagttacaatcatttttcgcttattttattcacacttt 743 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || Sbjct: 5401 cgcttcgaagtgacgctcttggaagttacaatcatttttcgcttattttattcacacctt 5342 Query: 744 cttaaaatcaataaagccagtggaacgaaatttgatgaatattatttaccaaacgaatga 803 ||||||||||||||||| ||||||||||| || |||| || ||||| ||||||| || Sbjct: 5341 cttaaaatcaataaagcgagtggaacgaagttgaatgagaataatttagcaaacgataga 5282 Query: 804 attgatcgaaaagaactgtttcttt 828 || ||||||||||||||||| |||| Sbjct: 5281 atagatcgaaaagaactgttacttt 5257 Database: Klactis 3X assemblage 11/02 Posted date: Nov 27, 2002 12:23 PM Number of letters in database: 10,358,551 Number of sequences in database: 1807 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 12,043 Number of Sequences: 1807 Number of extensions: 12043 Number of successful extensions: 56 Number of sequences better than 1.0e-20: 1 length of query: 892 length of database: 10,358,551 effective HSP length: 16 effective length of query: 876 effective length of database: 10,329,639 effective search space: 9048763764 effective search space used: 9048763764 T: 0 A: 40 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 50 (99.6 bits)