BLASTN 2.2.3 [May-13-2002] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= FJ0AC29ZE02FM1.SCF screened BAC_end (903 letters) Database: Klactis 3X assemblage 11/02 1807 sequences; 10,358,551 total letters Searching....done Score E Sequences producing significant alignments: (bits) Value 3x_Contig1791 1082 0.0 >3x_Contig1791 Length = 39945 Score = 1082 bits (546), Expect = 0.0 Identities = 635/658 (96%), Gaps = 5/658 (0%) Strand = Plus / Plus Query: 87 ttgcaaaacttctcgattcttcaacaaagttgtgctagtagatggaatggtaaattgggc 146 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 30865 ttgcaaaacttctcgattcttcaacaaagttgtgctagtagatggaatggtaaattgggc 30924 Query: 147 tccaataagagtgaaacatttgtttatatagcgctccacattttgctgctgatttctact 206 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 30925 tccaataagagtgaaacatttgtttatatagcgctccacattttgctgctgatttctact 30984 Query: 207 aacagcttgcttaaccttggcaatattataatgcaaaagtaatgagggatcgttaaacat 266 |||||||||| |||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 30985 aacagcttgcaaaaccttggcaatattataatgcaaaagtaatgagggatcgttaaacat 31044 Query: 267 ttgaatgtgctccactctttcaatccacctcgttaactcaacaatgttaccagtttgact 326 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 31045 ttgaatgtgctccactctttcaatccacctcgttaactcaacaatgttaccagtttgact 31104 Query: 327 gacagcttcaatacccatattcaacaaatctccgtcattatcgaccaagaatcccttcgt 386 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 31105 gacagcttcaatacccatattcaacaaatctccgtcattatcgaccaagaatcccttcgt 31164 Query: 387 ctcaggaagatgcactttaaccttcatcaatagttcttcgtatagttgatggctatacat 446 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 31165 ctcaggaagatgcactttaaccttcatcaatagttcttcgtatagttgatggctatacat 31224 Query: 447 tgactttaacattttcatatttgatgacttaaccagttctgaactagtggtagaattagc 506 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 31225 tgactttaacattttcatatttgatgacttaaccagttctgaactagtggtagaattagc 31284 Query: 507 tgatagcttaaaatcaccaagagcttcaaaacagtcttgagccattttcc-gttttttga 565 |||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| Sbjct: 31285 tgatagcttaaaatcaccaagagcttcaaaacagtcttgagccattttccagttttttga 31344 Query: 566 atattgcagttcttctatttttgtggtttaattcccagtag-aaacattttta-cacacc 623 |||||||||||||||||||||||||||| |||||||||||| |||||| |||| |||||| Sbjct: 31345 atattgcagttcttctatttttgtggttaaattcccagtagaaaacatctttagcacacc 31404 Query: 624 acctacagcgtctacatccccaattttggcattagtgttctgaatacattgc-attagtc 682 |||||||||||||||||||||||||| ||||| |||||||||||||||||| || |||| Sbjct: 31405 acctacagcgtctacatccccaatttcggcatatgtgttctgaatacattgcaataagtc 31464 Query: 683 gggggaacccaaaaacgaagttccggggttcctataactttgcttcaaggaaaagcgc 740 || ||| ||||| |||| |||||| | | |||||||||||| |||||| ||||||| Sbjct: 31465 ggtggacgccaaagacgaggttccgtgttctctataactttgc-tcaaggtaaagcgc 31521 Database: Klactis 3X assemblage 11/02 Posted date: Nov 27, 2002 12:23 PM Number of letters in database: 10,358,551 Number of sequences in database: 1807 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 7110 Number of Sequences: 1807 Number of extensions: 7110 Number of successful extensions: 54 Number of sequences better than 1.0e-20: 1 length of query: 903 length of database: 10,358,551 effective HSP length: 16 effective length of query: 887 effective length of database: 10,329,639 effective search space: 9162389793 effective search space used: 9162389793 T: 0 A: 40 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 50 (99.6 bits)