BLASTN 2.2.3 [May-13-2002] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= FJ0AC29ZE03FM1.SCF screened BAC_end (943 letters) Database: Klactis 3X assemblage 11/02 1807 sequences; 10,358,551 total letters Searching....done Score E Sequences producing significant alignments: (bits) Value 3x_Contig936 987 0.0 >3x_Contig936 Length = 3539 Score = 987 bits (498), Expect = 0.0 Identities = 531/538 (98%), Gaps = 3/538 (0%) Strand = Plus / Minus Query: 216 ccatatgctaaagtcttaccggaacctgtgctagccttacccatgatattatgtcctttc 275 ||||||| ||||||||||||||||||||||||||||||||||||||||||||| |||||| Sbjct: 3431 ccatatgttaaagtcttaccggaacctgtgctagccttacccatgatattatg-cctttc 3373 Query: 276 agagctaaaggaatagatttcaattgaatttctgtaggcctggtgaagccaagcccagag 335 ||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||| Sbjct: 3372 agagctaaaggaatagagttcaattgaatttctgtaggcctggtgaagccaagcccagag 3313 Query: 336 agtcctttcagcactgtgaatgagagatccatattttcggaccactcaggaagtactgga 395 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 3312 agtcctttcagcactgtgaatgagagatccatattttcggaccactcaggaagtactgga 3253 Query: 396 ggctcttgatcatcgatatcgacgttagaggaaaatacgttgctctgtaataagtcatca 455 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 3252 ggctcttgatcatcgatatcgacgttagaggaaaatacgttgctctgtaataagtcatca 3193 Query: 456 tttgtttgatcttcagtgacaacagtacctgcttcccccttaacattttccttctcggat 515 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 3192 tttgtttgatcttcagtgacaacagtacctgcttcccccttaacattttccttctcggat 3133 Query: 516 ctttcttcttcttgatcttctgcttcttctccctcttctccttcttcttcagtggacaca 575 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 3132 ctttcttcttcttgatcttctgcttcttctccctcttctccttcttcttcagtggacaca 3073 Query: 576 tggaactcgctctcttcatcatccgaagctgcacttaactcaccctccttgatatcgtca 635 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 3072 tggaactcgctctcttcatcatccgaagctgcacttaactcaccctccttgatatcgtca 3013 Query: 636 aaattcttgaattcaattaatttatccatgttgacatcttcatcatcctcttggaaaacg 695 |||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||| Sbjct: 3012 aaattcttgaattcaattaattcatccatgttgacatcttcatcatcctcttggaaaacg 2953 Query: 696 atattatccttttccttcacttgctccggcttctttcttanacgttcttgttatcttt 753 |||||||||||||||| ||||||||||||| ||||||||| ||||||||||||||||| Sbjct: 2952 atattatccttttcctccacttgctccggc-tctttctta-acgttcttgttatcttt 2897 Database: Klactis 3X assemblage 11/02 Posted date: Nov 27, 2002 12:23 PM Number of letters in database: 10,358,551 Number of sequences in database: 1807 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 8682 Number of Sequences: 1807 Number of extensions: 8682 Number of successful extensions: 167 Number of sequences better than 1.0e-20: 1 length of query: 943 length of database: 10,358,551 effective HSP length: 16 effective length of query: 927 effective length of database: 10,329,639 effective search space: 9575575353 effective search space used: 9575575353 T: 0 A: 40 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 50 (99.6 bits)