BLASTN 2.2.3 [May-13-2002] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= FJ0AC29ZE03RM1.SCF screened BAC_end (921 letters) Database: Klactis 3X assemblage 11/02 1807 sequences; 10,358,551 total letters Searching....done Score E Sequences producing significant alignments: (bits) Value 3x_Contig939 1576 0.0 >3x_Contig939 Length = 3877 Score = 1576 bits (795), Expect = 0.0 Identities = 848/862 (98%), Gaps = 3/862 (0%) Strand = Plus / Plus Query: 50 agttgcaattagagcaacttgagaacgattttgctcctgcttctccaaattctgaaatta 109 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 371 agttgcaattagagcaacttgagaacgattttgctcctgcttctccaaattctgaaatta 430 Query: 110 aatcaaactgaacatcatatagcaatatagaaatgccctgtatataatacacatcattca 169 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 431 aatcaaactgaacatcatatagcaatatagaaatgccctgtatataatacacatcattca 490 Query: 170 acgccatttctccagatttatacaccatatcaatcaaattgatatctgtattcacaagtt 229 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 491 acgccatttctccagatttatacaccatatcaatcaaattgatatctgtattcacaagtt 550 Query: 230 gtagcaacttttgtctatttaatgctctaaagtctaaaaatataagaatgagcttgtctc 289 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 551 gtagcaacttttgtctatttaatgctctaaagtctaaaaatataagaatgagcttgtctc 610 Query: 290 acttttacacatcgttttgtggagtagaagactctgtgtttttgttgtccaacaatcttt 349 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 611 acttttacacatcgttttgtggagtagaagactctgtgtttttgttgtccaacaatcttt 670 Query: 350 cttcgagaacctgtagggctaactttttccttctttcttccgcttcagagccttcaacag 409 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 671 cttcgagaacctgtagggctaactttttccttctttcttccgcttcagagccttcaacag 730 Query: 410 gcttagcacccctcttttgagccaaaatgttagcttgttcgatatcgtatactctaaacg 469 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 731 gcttagcacccctcttttgagccaaaatgttagcttgttcgatatcgtatactctaaacg 790 Query: 470 gagttgcaatacgccaatcaacaataaacttctggtaaaggtaatcaaatattggctcaa 529 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 791 gagttgcaatacgccaatcaacaataaacttctggtaaaggtaatcaaatattggctcaa 850 Query: 530 gtactggtttgactaaatccgggaagaaatatatcaattggaatgtctcagaggcatctc 589 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 851 gtactggtttgactaaatccgggaagaaatatatcaattggaatgtctcagaggcatctc 910 Query: 590 ctaccacttcaaattcagcatcctcagccatcgaagcaggtagcctctgatagaatctca 649 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 911 ctaccacttcaaattcagcatcctcagccatcgaagcaggtagcctctgatagaatctca 970 Query: 650 agtagaaataacaggtgaaaaaagtgatccaaattgataataactgagagaagtggtgga 709 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 971 agtagaaataacaggtgaaaaaagtgatccaaattgataataactgagagaagtggtgga 1030 Query: 710 accacagaagttgcacaaacgaaagcacaagtagagtaaatattggcaggagtttaaatc 769 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1031 accacagaagttgcacaaacgaaagcacaagtagagtaaatattggcaggagtttaaatc 1090 Query: 770 tgaaattcttgg-aatgaaaggtagattcttagtctcgaaaatggtagtttctgggaata 828 |||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1091 tgaaattcttggaaatgaaaggtagattcttagtctcgaaaatggtagtttctgggaata 1150 Query: 829 cctgtttgtagat-ataaggaaccccacccaaaatgtataattaccctnccttggtaaat 887 |||||||||||| ||| ||||||||||| ||| |||||||||||| | | |||||||| Sbjct: 1151 actgtttgtagataatagggaaccccaccaaaattgtataattaccatccaatggtaaat 1210 Query: 888 tcaaactctattgttgacgaaa 909 ||| || ||||| |||||||| Sbjct: 1211 ccaacct-tattgctgacgaaa 1231 Database: Klactis 3X assemblage 11/02 Posted date: Nov 27, 2002 12:23 PM Number of letters in database: 10,358,551 Number of sequences in database: 1807 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 7455 Number of Sequences: 1807 Number of extensions: 7455 Number of successful extensions: 56 Number of sequences better than 1.0e-20: 1 length of query: 921 length of database: 10,358,551 effective HSP length: 16 effective length of query: 905 effective length of database: 10,329,639 effective search space: 9348323295 effective search space used: 9348323295 T: 0 A: 40 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 50 (99.6 bits)