BLASTN 2.2.3 [May-13-2002] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= FJ0AC29ZE10FM1.SCF screened BAC_end (932 letters) Database: Klactis 3X assemblage 11/02 1807 sequences; 10,358,551 total letters Searching....done Score E Sequences producing significant alignments: (bits) Value 3x_Contig1384 1235 0.0 >3x_Contig1384 Length = 9372 Score = 1235 bits (623), Expect = 0.0 Identities = 684/702 (97%), Gaps = 2/702 (0%) Strand = Plus / Plus Query: 86 tccttctaggaatagccttcttctcttgcgtttccccactcgagaggcatttttattgct 145 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 8075 tccttctaggaatagccttcttctcttgcgtttccccactcgagaggcatttttattgct 8134 Query: 146 cgcttacgtttatccttcctgcacctttaaattccgatatggaattttttcgtaatgtcc 205 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 8135 cgcttacgtttatccttcctgcacctttaaattccgatatggaattttttcgtaatgtcc 8194 Query: 206 aaaattgcaaccattttaaaggtaaaaaagatcaatgaaggatgaagaatgaaaagaatc 265 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 8195 aaaattgcaaccattttaaaggtaaaaaagatcaatgaaggatgaagaatgaaaagaatc 8254 Query: 266 aacaactcggtctcttcattcttactgttactatacactactcctagattctgatagtgg 325 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 8255 aacaactcggtctcttcattcttactgttactatacactactcctagattctgatagtgg 8314 Query: 326 tagcatcaatggtgaagtaccagtaactaaagatgagggatccaacagagttacaacctg 385 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 8315 tagcatcaatggtgaagtaccagtaactaaagatgagggatccaacagagttacaacctg 8374 Query: 386 tgcattcattgccatctttacgatccggtactaaatcaatagcaagcgatgaggcatctg 445 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 8375 tgcattcattgccatctttacgatccggtactaaatcaatagcaagcgatgaggcatctg 8434 Query: 446 agcctaaacaattacattcagatagcaggattaactgtggtgatgtcgctgatcctgata 505 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 8435 agcctaaacaattacattcagatagcaggattaactgtggtgatgtcgctgatcctgata 8494 Query: 506 tacagtatattggacctaatacangaaaggtagagtccttgagtcagaaaatttcaaaga 565 ||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| Sbjct: 8495 tacagtatattggacctaatacagaaaaggtagagtccttgagtcagaaaatttcaaaga 8554 Query: 566 taagcagtctccgagataagtcccttgttgttcccagatcagaaagaagaagattgcttg 625 |||||||||||||||||||||||||||||||||||| |||| ||| || | ||| ||| Sbjct: 8555 taagcagtctccgagataagtcccttgttgttcccatatcataaataatagtatttcttt 8614 Query: 626 cgaacctagcgataatcccggaatataaagactctagagagtatccacgacactttgaag 685 ||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| Sbjct: 8615 cgaacctagcgataatcccggaatataaagactctagagagtatccacgacac-ttgaag 8673 Query: 686 tcatttatcgtacttatcattgcatatggagctgtcatgggtcccatggggactttttat 745 |||||||||||||||||||||||||||||||||||||||||||||||||| |||| | | Sbjct: 8674 tcatttatcgtacttatcattgcatatggagctgtcatgggtcccatgggaacttctatt 8733 Query: 746 tttttccctgcaattggtccttttagtagcggatttccatac 787 ||||||||||||||||||| |||||||||||||||| |||| Sbjct: 8734 attttccctgcaattggtcc-tttagtagcggatttcgatac 8774 Database: Klactis 3X assemblage 11/02 Posted date: Nov 27, 2002 12:23 PM Number of letters in database: 10,358,551 Number of sequences in database: 1807 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 6871 Number of Sequences: 1807 Number of extensions: 6871 Number of successful extensions: 47 Number of sequences better than 1.0e-20: 1 length of query: 932 length of database: 10,358,551 effective HSP length: 16 effective length of query: 916 effective length of database: 10,329,639 effective search space: 9461949324 effective search space used: 9461949324 T: 0 A: 40 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 50 (99.6 bits)