BLASTN 2.2.3 [May-13-2002] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= FJ0AC29ZF01FM1.SCF screened BAC_end (877 letters) Database: Klactis 3X assemblage 11/02 1807 sequences; 10,358,551 total letters Searching....done Score E Sequences producing significant alignments: (bits) Value 3x_Contig1617 1205 0.0 >3x_Contig1617 Length = 15119 Score = 1205 bits (608), Expect = 0.0 Identities = 725/755 (96%), Gaps = 7/755 (0%) Strand = Plus / Plus Query: 89 gtctagatctgctagagtcacttggttttatgataggaatttccttagttttaattgatt 148 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 34 gtctagatctgctagagtcacttggttttatgataggaatttccttagttttaattgatt 93 Query: 149 caaattttgatctgacctcttcaatctcttcttcagcttcttcttcttcgttagaatctg 208 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 94 caaattttgatctgacctcttcaatctcttcttcagcttcttcttcttcgttagaatctg 153 Query: 209 agaactcttctctttgggtcttgttctctaaattagatggtttcttttgtcccttctttt 268 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 154 agaactcttctctttgggtcttgttctctaaattagatggtttcttttgtcccttctttt 213 Query: 269 cagcccaaagttgagctggtgacttttcattcttgaaacccttgatcaccttatcgtcgc 328 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 214 cagcccaaagttgagctggtgacttttcattcttgaaacccttgatcaccttatcgtcgc 273 Query: 329 tatcgtttcctgatgattgagctgaggaagaactctttggtcccaagactttgttgtatt 388 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 274 tatcgtttcctgatgattgagctgaggaagaactctttggtcccaagactttgttgtatt 333 Query: 389 ctgcatccctctttagcttggattcttgctttaatttagcaatctcagattgaggatcaa 448 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 334 ctgcatccctctttagcttggattcttgctttaatttagcaatctcagattgaggatcaa 393 Query: 449 tctttttgtcgtaattaggccccgaaacaactagacggggatcttctttactgttttctt 508 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 394 tctttttgtcgtaattaggccccgaaacaactagacggggatcttctttactgttttctt 453 Query: 509 cagcaatcactttttgtagatcaactttaccaattggtttccaggaagaagaattggtnt 568 ||||||||||||||||||||||||||||||||||||||||||||||||||||||| | | Sbjct: 454 cagcaatcactttttgtagatcaactttaccaattggtttccaggaagaagaatttggtt 513 Query: 569 ctagtggtttcctgtcgaaatcacgttcttccaattctggttcaccccattcatcgtcct 628 ||||||||||| |||||||||||||||||||||| ||||||||||||||||||||||||| Sbjct: 514 ctagtggtttcttgtcgaaatcacgttcttccaactctggttcaccccattcatcgtcct 573 Query: 629 tcttacctctgctcttctcagtctttgggggagaaaccggatcttcttga-gggaaccat 687 |||||||||||||||||||||||||||||||||||| ||||||||||||| |||||| || Sbjct: 574 tcttacctctgctcttctcagtctttgggggagaaa-cggatcttcttgatgggaacgat 632 Query: 688 ggtgtaggtttcttttgctcagattgtctgaatg-aaccctgactggtttctttggctgt 746 |||||||||| ||||||||||||||||||| ||| ||| |||||||||||| |||||||| Sbjct: 633 ggtgtaggttccttttgctcagattgtctggatgaaacactgactggtttc-ttggctgt 691 Query: 747 ctgggcaaca-aggaaatggttttctttgaggccggggtttgttgttaatttgaa-aacg 804 || |||| || ||||||| | ||||| |||||||| |||||||||| | ||||| |||| Sbjct: 692 cttggcagcagaggaaattggcttcttggaggccggtgtttgttgttgaattgaataacg 751 Query: 805 ggcccca-cggagtgcctgttttttattaacaatt 838 ||| ||| |||||| ||| |||| |||||||||| Sbjct: 752 ggcaccagcggagttgctgattttcattaacaatt 786 Database: Klactis 3X assemblage 11/02 Posted date: Nov 27, 2002 12:23 PM Number of letters in database: 10,358,551 Number of sequences in database: 1807 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 8387 Number of Sequences: 1807 Number of extensions: 8387 Number of successful extensions: 158 Number of sequences better than 1.0e-20: 1 length of query: 877 length of database: 10,358,551 effective HSP length: 16 effective length of query: 861 effective length of database: 10,329,639 effective search space: 8893819179 effective search space used: 8893819179 T: 0 A: 40 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 50 (99.6 bits)