BLASTN 2.2.3 [May-13-2002] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= FJ0AC29ZF04FM1.SCF screened BAC_end (896 letters) Database: Klactis 3X assemblage 11/02 1807 sequences; 10,358,551 total letters Searching....done Score E Sequences producing significant alignments: (bits) Value 3x_Contig1787 1178 0.0 >3x_Contig1787 Length = 34189 Score = 1178 bits (594), Expect = 0.0 Identities = 711/740 (96%), Gaps = 8/740 (1%) Strand = Plus / Minus Query: 86 ttatattctgtggacgtggtgcgaagctaacaccgttttcca-tgttcgtggagacactg 144 |||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| Sbjct: 23555 ttatattctgtggacgtggtgcgaagctaacaccgttttccaatgttcgtggagacactg 23496 Query: 145 gtgttcccaaagctctattgccggttgcaaaccgctccatgattgagttcgtactagatt 204 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 23495 gtgttcccaaagctctattgccggttgcaaaccgctccatgattgagttcgtactagatt 23436 Query: 205 ggtgtgagcaagcccaatttaaagaggtcaatctagttattgacgcatccgatgctgacg 264 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 23435 ggtgtgagcaagcccaatttaaagaggtcaatctagttattgacgcatccgatgctgacg 23376 Query: 265 aattagaggaaagtttgaaaaaataccgtgaagtgagagggcattattttggactgttat 324 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 23375 aattagaggaaagtttgaaaaaataccgtgaagtgagagggcattattttggactgttat 23316 Query: 325 cccaaagcgttggatcgaaccatgctcactatttgaaaaaaccatctcctattaatatta 384 |||||||||||||||||||||||||||||||||||||||| |||||| |||||||||||| Sbjct: 23315 cccaaagcgttggatcgaaccatgctcactatttgaaaaa-ccatctnctattaatatta 23257 Query: 385 taccctcaaaatgtgagaatacaggagaatgtctgaagaatgaattgctagataagataa 444 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 23256 taccctcaaaatgtgagaatacaggagaatgtctgaagaatgaattgctagataagataa 23197 Query: 445 ctggagatttcgtgttgttaccttgtgatttcatcacagacattccaccacaggtgtttt 504 |||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| Sbjct: 23196 ctggagatttcgtgttgttaccttttgatttcatcacagacattccaccacaggtgtttt 23137 Query: 505 tagatcagtatttgaataaagatccggagaatctagctatggcagtatattatcacaatg 564 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 23136 tagatcagtatttgaataaagatccggagaatctagctatggcagtatattatcacaatg 23077 Query: 565 ggtttgagaatatcgantagaagcatttaaagcaattcctgactgtatactccgagaatt 624 |||||||||||||||| |||||||||||||||||||||||||||||||||||||||||| Sbjct: 23076 ggtttgagaatatcgataagaagcatttaaagcaattcctgactgtatactccgagaatt 23017 Query: 625 tggagtctgttagtaagcccgttcttctagacgtttattccaaagacgatgtgggacaaa 684 |||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| Sbjct: 23016 tggagtctgttagtaagcccgttcttctagacgtttattccaaagacgatgt-ggacaaa 22958 Query: 685 cgaaaatttttac-aatcagat-ccaaatgctttggagatattccgacttctttttattc 742 |||| ||||| |||||||| ||||||||||||||||||| | ||| || | ||| | Sbjct: 22957 acgaaatatttacaaatcagatcccaaatgctttggagatatccgaactcctctgtatcc 22898 Query: 743 acaaaattactgaactc-cttcatttacttttgcttctcatgaagttagtaacctttttg 801 ||||||||||||||||| |||||||||||||||| ||||||| ||||||||| | | ||| Sbjct: 22897 acaaaattactgaactctcttcatttacttttgc-tctcatg-agttagtaaacctattg 22840 Query: 802 aaggttgaaaaccagaaagg 821 |||| ||||| | ||||||| Sbjct: 22839 aaggatgaaaccgagaaagg 22820 Database: Klactis 3X assemblage 11/02 Posted date: Nov 27, 2002 12:23 PM Number of letters in database: 10,358,551 Number of sequences in database: 1807 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 6277 Number of Sequences: 1807 Number of extensions: 6277 Number of successful extensions: 47 Number of sequences better than 1.0e-20: 1 length of query: 896 length of database: 10,358,551 effective HSP length: 16 effective length of query: 880 effective length of database: 10,329,639 effective search space: 9090082320 effective search space used: 9090082320 T: 0 A: 40 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 50 (99.6 bits)