BLASTN 2.2.3 [May-13-2002] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= FJ0AC29ZF04RM1.SCF screened BAC_end (911 letters) Database: Klactis 3X assemblage 11/02 1807 sequences; 10,358,551 total letters Searching....done Score E Sequences producing significant alignments: (bits) Value 3x_Contig1103 1302 0.0 >3x_Contig1103 Length = 3850 Score = 1302 bits (657), Expect = 0.0 Identities = 706/715 (98%), Gaps = 6/715 (0%) Strand = Plus / Plus Query: 50 gtagccagtatatgagaattgttaaaggaattgtaataatagcgaggaatctttcagttg 109 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 424 gtagccagtatatgagaattgttaaaggaattgtaataatagcgaggaatctttcagttg 483 Query: 110 caaatcaggttatacctcaaaatattctactacctaacacattcctggcatggtatttat 169 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 484 caaatcaggttatacctcaaaatattctactacctaacacattcctggcatggtatttat 543 Query: 170 ccatttccagacaaactgtgtgtacgcctggtgatttgaagcaattatatggtctagtat 229 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 544 ccatttccagacaaactgtgtgtacgcctggtgatttgaagcaattatatggtctagtat 603 Query: 230 gtcaattttacttcaattgcacccgaactaatgttgtctttgatgagagctgttttgatg 289 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 604 gtcaattttacttcaattgcacccgaactaatgttgtctttgatgagagctgttttgatg 663 Query: 290 atcatatgaatttcatggtagaaatgctgcggtttattgatgatgatggcattgttaatg 349 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 664 atcatatgaatttcatggtagaaatgctgcggtttattgatgatgatggcattgttaatg 723 Query: 350 cgtactctctgtggctctcaaatataatgaaaagtgatgcattcatctcatctttactca 409 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 724 cgtactctctgtggctctcaaatataatgaaaagtgatgcattcatctcatctttactca 783 Query: 410 atgatattagatctttggaagttatcgacaaactactactgcggggaataattgcacaga 469 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 784 atgatattagatctttggaagttatcgacaaactactactgcggggaataattgcacaga 843 Query: 470 aaactgagattgacttgctcgttgaagaggaagatgaggataaaaatctttcttccttag 529 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 844 aaactgagattgacttgctcgttgaagaggaagatgaggataaaaatctttcttccttag 903 Query: 530 ctactattcaactaaaaatattaaaacagttagtaacacatgaatgcttcgggtcttata 589 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 904 ctactattcaactaaaaatattaaaacagttagtaacacatgaatgcttcgggtcttata 963 Query: 590 tgaaaaccttacgaaaagaatatggttttgcttctttcaac-aaatgttcaagattgtca 648 ||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||| Sbjct: 964 tgaaaaccttacgaaaagaatatggttttgcttctttcaacaaaatgttcaagattgtca 1023 Query: 649 caatgttggtgaccagttcagaaagatgggacctttatcaggtgactgnncattctaagc 708 ||||||||||||||||||||||||||||||||||||||||| |||||| ||||||||| Sbjct: 1024 caatgttggtgaccagttcagaaagatgggacctttatcagttgactgca-attctaagc 1082 Query: 709 tggactttttgatatttttcgaagaatatacatattctagtgggatgctttcttt 763 ||||| |||||||| ||||||||||||||||||| |||||| ||||||||||||| Sbjct: 1083 tggac-ttttgata-ttttcgaagaatatacata-tctagt-ggatgctttcttt 1133 Database: Klactis 3X assemblage 11/02 Posted date: Nov 27, 2002 12:23 PM Number of letters in database: 10,358,551 Number of sequences in database: 1807 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 8535 Number of Sequences: 1807 Number of extensions: 8535 Number of successful extensions: 57 Number of sequences better than 1.0e-20: 1 length of query: 911 length of database: 10,358,551 effective HSP length: 16 effective length of query: 895 effective length of database: 10,329,639 effective search space: 9245026905 effective search space used: 9245026905 T: 0 A: 40 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 50 (99.6 bits)