BLASTN 2.2.3 [May-13-2002]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= FJ0AC29ZF12FM1.SCF screened BAC_end
         (939 letters)

Database: Klactis 3X assemblage 11/02 
           1807 sequences; 10,358,551 total letters

Searching....done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

3x_Contig1509                                                        1483   0.0  

>3x_Contig1509 
          Length = 8584

 Score = 1483 bits (748), Expect = 0.0
 Identities = 823/846 (97%), Gaps = 2/846 (0%)
 Strand = Plus / Minus

                                                                        
Query: 86   ttcttccaatgactaaagagttatcatcgtcgttcaccgtatcataacttcaaaacgaaa 145
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 8035 ttcttccaatgactaaagagttatcatcgtcgttcaccgtatcataacttcaaaacgaaa 7976

                                                                        
Query: 146  gtaactctttaccttcatgtgtatgttctgtagtgttctctgtctctgtttggacggact 205
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 7975 gtaactctttaccttcatgtgtatgttctgtagtgttctctgtctctgtttggacggact 7916

                                                                        
Query: 206  tttatcaattttgtaacgatgacagagacaaaataaccgcatagataaacaaacaaacaa 265
            ||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 7915 tttatcaattttggaacgatgacagagacaaaataaccgcatagataaacaaacaaacaa 7856

                                                                        
Query: 266  acaaacggagcacgatacacgtaactggacaagaaactgcaaacagtatggatctggaat 325
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 7855 acaaacggagcacgatacacgtaactggacaagaaactgcaaacagtatggatctggaat 7796

                                                                        
Query: 326  cagagatcattcaactggtacggcaaaacataagaccaaaatttccttctttgaatgatg 385
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 7795 cagagatcattcaactggtacggcaaaacataagaccaaaatttccttctttgaatgatg 7736

                                                                        
Query: 386  aacaacaagcaagattggacaatgcactgaagtatgatgtgaactacgatatattgaaga 445
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 7735 aacaacaagcaagattggacaatgcactgaagtatgatgtgaactacgatatattgaaga 7676

                                                                        
Query: 446  aagagctagtcgaatatatagatgattggaaacgaaatgaatactatgatgtcttgacaa 505
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 7675 aagagctagtcgaatatatagatgattggaaacgaaatgaatactatgatgtcttgacaa 7616

                                                                        
Query: 506  atatcggtgatttacaacgtctagatttgggaaatatgttgaacggagatggagttagtt 565
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 7615 atatcggtgatttacaacgtctagatttgggaaatatgttgaacggagatggagttagtt 7556

                                                                        
Query: 566  ttcccaagttacacagtgatctagccaacctacctagattcagacttatcgataatgaaa 625
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 7555 ttcccaagttacacagtgatctagccaacctacctagattcagacttatcgataatgaaa 7496

                                                                        
Query: 626  atgaaatggatcaaagtctcctacataagtatgactctttaaggacaagactaatcgaaa 685
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 7495 atgaaatggatcaaagtctcctacataagtatgactctttaaggacaagactaatcgaaa 7436

                                                                        
Query: 686  aatgcagagccattgagcttatacgaagtgcaacaaatactgatgttaattaccaggata 745
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 7435 aatgcagagccattgagcttatacgaagtgcaacaaatactgatgttaattaccaggata 7376

                                                                        
Query: 746  tcaatttcatgttatccgttgtggaactgagacaatggcaagatgagatccanatggaat 805
            |||||| |||||||||||||||||||||||||||||||| |||||||||||| |||||||
Sbjct: 7375 tcaattccatgttatccgttgtggaactgagacaatggcgagatgagatccaaatggaat 7316

                                                                        
Query: 806  ggaaagaactggctcaaaancttgaattaattttgaaaacttgccctaattt-acagaaa 864
            ||||||||||||||||||| || |||||||||||||||||||| ||| |||| |||||| 
Sbjct: 7315 ggaaagaactggctcaaaatctcgaattaattttgaaaacttggcctgatttaacagaag 7256

                                                                        
Query: 865  taaagcgattccaacttttccagctaaatgactttgaatttattggaatcgatattggac 924
             |||||||| | |||| || |||||||  |||| | | || |||| ||||||||||| ||
Sbjct: 7255 aaaagcgatccaaactcttacagctaatcgactct-agttcattgaaatcgatattgcac 7197

                  
Query: 925  atcaaa 930
            ||||||
Sbjct: 7196 atcaaa 7191


  Database: Klactis 3X assemblage 11/02
    Posted date:  Nov 27, 2002 12:23 PM
  Number of letters in database: 10,358,551
  Number of sequences in database:  1807
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 9063
Number of Sequences: 1807
Number of extensions: 9063
Number of successful extensions: 83
Number of sequences better than 1.0e-20: 1
length of query: 939
length of database: 10,358,551
effective HSP length: 16
effective length of query: 923
effective length of database: 10,329,639
effective search space: 9534256797
effective search space used: 9534256797
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 50 (99.6 bits)