BLASTN 2.2.3 [May-13-2002] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= FJ0AC29ZG01FM1.SCF screened BAC_end (910 letters) Database: Klactis 3X assemblage 11/02 1807 sequences; 10,358,551 total letters Searching....done Score E Sequences producing significant alignments: (bits) Value 3x_Contig1238 1126 0.0 >3x_Contig1238 Length = 5289 Score = 1126 bits (568), Expect = 0.0 Identities = 581/584 (99%), Gaps = 1/584 (0%) Strand = Plus / Minus Query: 86 cggggttcaaatgtaagccaatctcatgagccattctaaaggctaaccccgattcatacc 145 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1475 cggggttcaaatgtaagccaatctcatgagccattctaaaggctaaccccgattcatacc 1416 Query: 146 atgctaatggattctcgccatttccaatatcatagaaggcaaggcataaaattgtttgga 205 ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| Sbjct: 1415 atgctaatggattctcgccatttccaatatcatagaaggcaaggcataaaagtgtttgga 1356 Query: 206 tgatacccaatttataagatgatgaataactcgcagtagatccatctagctggaagattt 265 |||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1355 tgatacccaatttagaagatgatgaataactcgcagtagatccatctagctggaagattt 1296 Query: 266 tatttaatacttttgttttagccagtgtgtaatattcttgagatttcttgtacagttctt 325 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1295 tatttaatacttttgttttagccagtgtgtaatattcttgagatttcttgtacagttctt 1236 Query: 326 cgttcttatcggcaagcttacttcctaaagcagcaattgcaaacaccaattctttagaac 385 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1235 cgttcttatcggcaagcttacttcctaaagcagcaattgcaaacaccaattctttagaac 1176 Query: 386 agtagtatgcttttgtagaaggctcaccgaaaagggcgcttagaaaggtttctctatgaa 445 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1175 agtagtatgcttttgtagaaggctcaccgaaaagggcgcttagaaaggtttctctatgaa 1116 Query: 446 tgaaagtataatggccaggatataaccatttgaaaaacaacgataaagcaggtagtatca 505 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1115 tgaaagtataatggccaggatataaccatttgaaaaacaacgataaagcaggtagtatca 1056 Query: 506 ctggcgacctggacaatgttcggagattagaggtagtcatatctcgattgacatcgttgg 565 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1055 ctggcgacctggacaatgttcggagattagaggtagtcatatctcgattgacatcgttgg 996 Query: 566 aaaatatttttgtgatggctagagaatcgttagaatagatactggatgaaaccacttggt 625 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 995 aaaatatttttgtgatggctagagaatcgttagaatagatactggatgaaaccacttggt 936 Query: 626 tattttttggtcaatgtactttgcatatttggtgatgaaggagt 669 || ||||||||||||||||||||||||||||||||||||||||| Sbjct: 935 ta-tttttggtcaatgtactttgcatatttggtgatgaaggagt 893 Database: Klactis 3X assemblage 11/02 Posted date: Nov 27, 2002 12:23 PM Number of letters in database: 10,358,551 Number of sequences in database: 1807 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 6793 Number of Sequences: 1807 Number of extensions: 6793 Number of successful extensions: 49 Number of sequences better than 1.0e-20: 1 length of query: 910 length of database: 10,358,551 effective HSP length: 16 effective length of query: 894 effective length of database: 10,329,639 effective search space: 9234697266 effective search space used: 9234697266 T: 0 A: 40 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 50 (99.6 bits)