BLASTN 2.2.3 [May-13-2002] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= FJ0AC29ZG01RM1.SCF screened BAC_end (958 letters) Database: Klactis 3X assemblage 11/02 1807 sequences; 10,358,551 total letters Searching....done Score E Sequences producing significant alignments: (bits) Value 3x_Contig429 1120 0.0 >3x_Contig429 Length = 1524 Score = 1120 bits (565), Expect = 0.0 Identities = 590/597 (98%), Gaps = 1/597 (0%) Strand = Plus / Minus Query: 48 attgccgagtttgggaagaatggtaaaccaactccttcccaatctactacttccttggca 107 |||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||| Sbjct: 597 attgccgagtttgggaagaagggtaaaccaactccttcccaatctactacttccttggca 538 Query: 108 aaattagcgtcggaaggaattgaatcttattcagactcaaagatctctgaaattaccgta 167 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 537 aaattagcgtcggaaggaattgaatcttattcagactcaaagatctctgaaattaccgta 478 Query: 168 gatataaatcagttggacaccgaaaacttatctgaagctgaagacctaaaatctctaaga 227 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 477 gatataaatcagttggacaccgaaaacttatctgaagctgaagacctaaaatctctaaga 418 Query: 228 agagcttctttggcaaccttaggctcaattggttttgatgacaatgaaaatagcgccaga 287 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 417 agagcttctttggcaaccttaggctcaattggttttgatgacaatgaaaatagcgccaga 358 Query: 288 agagaacacagggaacaaggtaaagtcaaatgggatatttatatggagtacgcccgtgcg 347 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 357 agagaacacagggaacaaggtaaagtcaaatgggatatttatatggagtacgcccgtgcg 298 Query: 348 tgtaacccccgcaacgtgtgtgtgtttttgggtttcctaatcctctcgatgctgttggcc 407 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 297 tgtaacccccgcaacgtgtgtgtgtttttgggtttcctaatcctctcgatgctgttggcc 238 Query: 408 gtcattggtaatttctggctcaaacactggtcagaagtcaatactgagaaaggctataac 467 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 237 gtcattggtaatttctggctcaaacactggtcagaagtcaatactgagaaaggctataac 178 Query: 468 ccccatgccacaagatatttgatgatttacttagctttaggtgttggttccgctctggca 527 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 177 ccccatgccacaagatatttgatgatttacttagctttaggtgttggttccgctctggca 118 Query: 528 acattaatacagactattgttctatgggtattctgtactatccatggcctcaagtattta 587 |||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| Sbjct: 117 acattaatacagactattgttctatgggtattctgtactatccatggctccaagtattta 58 Query: 588 catgatgcaatggcttcaagtgttttaaagggccctatgccttt-tttgaaacaact 643 ||||||||||||||||||||||||||||||| |||||| |||| |||||||||||| Sbjct: 57 catgatgcaatggcttcaagtgttttaaaggcacctatgtctttctttgaaacaact 1 Database: Klactis 3X assemblage 11/02 Posted date: Nov 27, 2002 12:23 PM Number of letters in database: 10,358,551 Number of sequences in database: 1807 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 9745 Number of Sequences: 1807 Number of extensions: 9745 Number of successful extensions: 56 Number of sequences better than 1.0e-20: 1 length of query: 958 length of database: 10,358,551 effective HSP length: 16 effective length of query: 942 effective length of database: 10,329,639 effective search space: 9730519938 effective search space used: 9730519938 T: 0 A: 40 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 51 (101.6 bits)