BLASTN 2.2.3 [May-13-2002] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= FJ0AC29ZG11FM1.SCF screened BAC_end (924 letters) Database: Klactis 3X assemblage 11/02 1807 sequences; 10,358,551 total letters Searching....done Score E Sequences producing significant alignments: (bits) Value 3x_Contig1620 1300 0.0 >3x_Contig1620 Length = 12263 Score = 1300 bits (656), Expect = 0.0 Identities = 688/696 (98%), Gaps = 2/696 (0%) Strand = Plus / Plus Query: 88 ctggttgaacttcgagattgccaggaattgtactcttacaccttttaacatattcgtcta 147 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1950 ctggttgaacttcgagattgccaggaattgtactcttacaccttttaacatattcgtcta 2009 Query: 148 attcgctctctgccattttttcattattaacaatccaaaggccttccacagaagcagaag 207 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 2010 attcgctctctgccattttttcattattaacaatccaaaggccttccacagaagcagaag 2069 Query: 208 tccctcgttttctaggtttattgctgtacggatcttccacccattgttgattacaattac 267 ||||||||| || ||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 2070 tccctcgttctccaggtttattgctgtacggatcttccacccattgttgattacaattac 2129 Query: 268 tccattggcccttttgtaaacttactctactttttttccatgggaatggtgcgatatagt 327 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 2130 tccattggcccttttgtaaacttactctactttttttccatgggaatggtgcgatatagt 2189 Query: 328 cgtcaaataatggatcacctaaatgattgcacatgtcttctcccagatactggaaccacc 387 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 2190 cgtcaaataatggatcacctaaatgattgcacatgtcttctcccagatactggaaccacc 2249 Query: 388 aattttctctgtttgtattgaaatctctgatagaagccaaactttctgttagcctttcaa 447 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 2250 aattttctctgtttgtattgaaatctctgatagaagccaaactttctgttagcctttcaa 2309 Query: 448 ccgaactttctattccttcccattctttgtccctcgtgatgtgctcttggttgttctgct 507 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 2310 ccgaactttctattccttcccattctttgtccctcgtgatgtgctcttggttgttctgct 2369 Query: 508 ttccgacacaatttgaacaaatccaaaccacaccttttgccggcttcttttctaagggcg 567 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 2370 ttccgacacaatttgaacaaatccaaaccacaccttttgccggcttcttttctaagggcg 2429 Query: 568 ggtccatgcaccacagatgaatcgatatcttacagtcatcacacttgatagaagacgatt 627 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 2430 ggtccatgcaccacagatgaatcgatatcttacagtcatcacacttgatagaagacgatt 2489 Query: 628 ggtggcaccaatcgcgacattcgccgcaacgcaaatcccagctttggtcttcggttcttt 687 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 2490 ggtggcaccaatcgcgacattcgccgcaacgcaaatcccagctttggtcttcggttcttt 2549 Query: 688 tgccacagacatatttggtaagtaggttatccagtgggaatttatccttatagaaaaaga 747 |||||||||||||||||||||||||||||||||||||||||||||||| |||||||| || Sbjct: 2550 tgccacagacatatttggtaagtaggttatccagtgggaatttatcctcatagaaaatga 2609 Query: 748 atggggattttacttgttaaaatctttgaaatacgg 783 || |||| |||||| ||||||||| ||||||||||| Sbjct: 2610 at-gggaatttactagttaaaatc-ttgaaatacgg 2643 Database: Klactis 3X assemblage 11/02 Posted date: Nov 27, 2002 12:23 PM Number of letters in database: 10,358,551 Number of sequences in database: 1807 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 6970 Number of Sequences: 1807 Number of extensions: 6970 Number of successful extensions: 36 Number of sequences better than 1.0e-20: 1 length of query: 924 length of database: 10,358,551 effective HSP length: 16 effective length of query: 908 effective length of database: 10,329,639 effective search space: 9379312212 effective search space used: 9379312212 T: 0 A: 40 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 50 (99.6 bits)