BLASTN 2.2.3 [May-13-2002] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= FJ0AC29ZG11RM1.SCF screened BAC_end (897 letters) Database: Klactis 3X assemblage 11/02 1807 sequences; 10,358,551 total letters Searching....done Score E Sequences producing significant alignments: (bits) Value 3x_Contig1261 1344 0.0 >3x_Contig1261 Length = 9103 Score = 1344 bits (678), Expect = 0.0 Identities = 805/842 (95%), Gaps = 4/842 (0%) Strand = Plus / Minus Query: 48 acgtttttagataatgcgcattctgtttttttgacatttattttatctttactggtgtga 107 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 4993 acgtttttagataatgcgcattctgtttttttgacatttattttatctttactggtgtga 4934 Query: 108 gatacactatgcgtggatacacatgaacctgcggaagaatgtcgtgcgagtctactttgg 167 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 4933 gatacactatgcgtggatacacatgaacctgcggaagaatgtcgtgcgagtctactttgg 4874 Query: 168 ccaaattcatcttacagttaatttggttaaatcaagatttacataatcttttatgtcaaa 227 ||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| Sbjct: 4873 ccaaattcatcttacagttaatttggttaaatcaagatttacataatctacaatgtcaaa 4814 Query: 228 ctaaacctggtagagatattcccgatcatttgtaattcataagctgacgacaattatgaa 287 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 4813 ctaaacctggtagagatattcccgatcatttgtaattcataagctgacgacaattatgaa 4754 Query: 288 ctaattgccttcgaattgaaagaaaatgagaattaggttatgttttaagttttgatctgc 347 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 4753 ctaattgccttcgaattgaaagaaaatgagaattaggttatgttttaagttttgatctgc 4694 Query: 348 caatgctccgttagtacgttgtctctgtttgttacactgtaaaacaatgcaacaggaggc 407 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 4693 caatgctccgttagtacgttgtctctgtttgttacactgtaaaacaatgcaacaggaggc 4634 Query: 408 aagtcctgcaatccaaagtgagtgcatcattggggttagtctttaaagttagtttaagat 467 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 4633 aagtcctgcaatccaaagtgagtgcatcattggggttagtctttaaagttagtttaagat 4574 Query: 468 aattgtttttctacgacgcgaacagtgttttgaactgcactttcagctcagtttaatggt 527 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 4573 aattgtttttctacgacgcgaacagtgttttgaactgcactttcagctcagtttaatggt 4514 Query: 528 gctcaaaagatagaagagaagataaaaaccattttatgatatcgattgggaaagaaaatg 587 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 4513 gctcaaaagatagaagagaagataaaaaccattttatgatatcgattgggaaagaaaatg 4454 Query: 588 aaatgataaaatgagacataactctatttaataaatattggatcatcttcattcttagac 647 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 4453 aaatgataaaatgagacataactctatttaataaatattggatcatcttcattcttagac 4394 Query: 648 tttagagtaccatttttttaagggactgtggttggtgttgattattttccatagtaatat 707 |||||||||||||||||| |||||||||||||| ||||||||||||| | |||||||||| Sbjct: 4393 tttagagtaccattttttaaagggactgtggtt-gtgttgattatttccaatagtaatat 4335 Query: 708 ttgaagaaccccaaatagcataaccgtgtgtactaattgga-cttgcgcgtaactttggt 766 ||||||||||| || |||||||||||||||||||||||||| |||||||||||||||| | Sbjct: 4334 ttgaagaacccaaattagcataaccgtgtgtactaattggaccttgcgcgtaactttgtt 4275 Query: 767 ttgattttaagtccaggattgaggtgttaaggtgatttgtatttttttttcgtttcaatt 826 | ||||| | || ||||| |||||||| | || | ||||||||||| ||||| |||||| Sbjct: 4274 tcgatttaatgtacaggagtgaggtgtcagtgt-agttgtattttttcttcgtatcaatt 4216 Query: 827 cttacgggtccgccatttta-ttgccccgaatccggacaaccgttggttgcttgcccttt 885 | ||| | | | ||||| | |||||| ||| | |||| || |||| ||||||||||||| Sbjct: 4215 cctactgatacagcatttaagttgcccggaagcaggacgacggttgtttgcttgcccttt 4156 Query: 886 tg 887 || Sbjct: 4155 tg 4154 Database: Klactis 3X assemblage 11/02 Posted date: Nov 27, 2002 12:23 PM Number of letters in database: 10,358,551 Number of sequences in database: 1807 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 8146 Number of Sequences: 1807 Number of extensions: 8146 Number of successful extensions: 64 Number of sequences better than 1.0e-20: 1 length of query: 897 length of database: 10,358,551 effective HSP length: 16 effective length of query: 881 effective length of database: 10,329,639 effective search space: 9100411959 effective search space used: 9100411959 T: 0 A: 40 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 50 (99.6 bits)