BLASTN 2.2.3 [May-13-2002] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= FJ0AC29ZH02FM1.SCF screened BAC_end (913 letters) Database: Klactis 3X assemblage 11/02 1807 sequences; 10,358,551 total letters Searching....done Score E Sequences producing significant alignments: (bits) Value 3x_Contig1650 1249 0.0 >3x_Contig1650 Length = 11257 Score = 1249 bits (630), Expect = 0.0 Identities = 737/758 (97%), Gaps = 11/758 (1%) Strand = Plus / Minus Query: 86 cacagtttgttgcatcattgcagaaacggtacccatccgccacttattacaaagtgttag 145 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1761 cacagtttgttgcatcattgcagaaacggtacccatccgccacttattacaaagtgttag 1702 Query: 146 agcaatatgtcaagtacaggcaatctcctgcgaaatatagttttgaaaatgggttaaagt 205 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1701 agcaatatgtcaagtacaggcaatctcctgcgaaatatagttttgaaaatgggttaaagt 1642 Query: 206 tgatcttggatgccaaatctcctccaagcgatgcgaaatcgctatcaatgtgccatcgat 265 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1641 tgatcttggatgccaaatctcctccaagcgatgcgaaatcgctatcaatgtgccatcgat 1582 Query: 266 ttttgttggaattaggttttgacaccaccagtgcattggaaccttatgaaagagcaatga 325 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1581 ttttgttggaattaggttttgacaccaccagtgcattggaaccttatgaaagagcaatga 1522 Query: 326 tgaaatacggtaattcggagacatgttatgattggttcttggagtcattgagggatttaa 385 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1521 tgaaatacggtaattcggagacatgttatgattggttcttggagtcattgagggatttaa 1462 Query: 386 attggagacatttgagtaagagtagtttccagatgccacgagtcaatgaaaaatcgaaat 445 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1461 attggagacatttgagtaagagtagtttccagatgccacgagtcaatgaaaaatcgaaat 1402 Query: 446 cgagattgttccaattctggaacagtattgctactgtagtatggtttcagttggataaag 505 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1401 cgagattgttccaattctggaacagtattgctactgtagtatggtttcagttggataaag 1342 Query: 506 ataacattaacgaaagggaattggatcttttacctaagttgacatataaattgacaagcg 565 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1341 ataacattaacgaaagggaattggatcttttacctaagttgacatataaattgacaagcg 1282 Query: 566 atttgaaacctttttgagaatgagcaagagttgatcgttttctg-aaagtttgtgaattg 624 |||||||||| ||||||||||||||||||||||||||||||||| ||||||||||||||| Sbjct: 1281 atttgaaacc-ttttgagaatgagcaagagttgatcgttttctgtaaagtttgtgaattg 1223 Query: 625 tttgaggataaatcacaggagatcgtggacgagatcctcaagtttttggaacatggtact 684 |||||||||||||||||||||||||||||||||||||||||||||| | ||||||||||| Sbjct: 1222 tttgaggataaatcacaggagatcgtggacgagatcctcaagttttggaaacatggtact 1163 Query: 685 tacttagacctttatttg-aaaacttcctt-tgggccatttggtgaaaatagacgatt-t 741 |||||||||||||||||| ||||||||||| ||||||||||||||||| ||||||||| | Sbjct: 1162 tacttagacctttatttgaaaaacttccttatgggccatttggtgaaattagacgattat 1103 Query: 742 taacttctttggaaacttgaaat-tcgttattg-ataaccttgac-attatggt-ttttg 797 |||| ||||||||| || ||| ||||||||| ||||||||||| |||||||| ||||| Sbjct: 1102 aaactcatttggaaacatggaatctcgttattgaataaccttgacgattatggtattttg 1043 Query: 798 caaaagattat-taagc-agttacaaacttggcaagtc 833 ||||||||||| | || |||||||||||||||||||| Sbjct: 1042 caaaagattatagatgcaagttacaaacttggcaagtc 1005 Database: Klactis 3X assemblage 11/02 Posted date: Nov 27, 2002 12:23 PM Number of letters in database: 10,358,551 Number of sequences in database: 1807 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 7674 Number of Sequences: 1807 Number of extensions: 7674 Number of successful extensions: 60 Number of sequences better than 1.0e-20: 1 length of query: 913 length of database: 10,358,551 effective HSP length: 16 effective length of query: 897 effective length of database: 10,329,639 effective search space: 9265686183 effective search space used: 9265686183 T: 0 A: 40 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 50 (99.6 bits)