BLASTN 2.2.3 [May-13-2002] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= FJ0AC29ZH03RM1.SCF screened BAC_end (952 letters) Database: Klactis 3X assemblage 11/02 1807 sequences; 10,358,551 total letters Searching....done Score E Sequences producing significant alignments: (bits) Value 3x_Contig1724 1261 0.0 >3x_Contig1724 Length = 20938 Score = 1261 bits (636), Expect = 0.0 Identities = 763/795 (95%), Gaps = 9/795 (1%) Strand = Plus / Minus Query: 49 tgccaaaattgataatgggtctgtaaacttcaagaacacgacatctcttttggaaaagaa 108 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9068 tgccaaaattgataatgggtctgtaaacttcaagaacacgacatctcttttggaaaagaa 9009 Query: 109 gtgatgcctatgtcaggcagctgatataacgaagttccgctttaatataatattccatca 168 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9008 gtgatgcctatgtcaggcagctgatataacgaagttccgctttaatataatattccatca 8949 Query: 169 caaaatacccgaataagagtatatacaaaaaaaaagattacgtacagtaacatccagaaa 228 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 8948 caaaatacccgaataagagtatatacaaaaaaaaagattacgtacagtaacatccagaaa 8889 Query: 229 atcagcccttgaattaagaaaaacgtcaatcctactactcatatgagtatactatccttt 288 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 8888 atcagcccttgaattaagaaaaacgtcaatcctactactcatatgagtatactatccttt 8829 Query: 289 tttagcgtgttatgcaactgactccatacctatgtatttccccgttattgtcacgtgact 348 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 8828 tttagcgtgttatgcaactgactccatacctatgtatttccccgttattgtcacgtgact 8769 Query: 349 ctgtttaattcgaaaatttttctggctcgatacctctcaacatgaaaattgactttcgca 408 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 8768 ctgtttaattcgaaaatttttctggctcgatacctctcaacatgaaaattgactttcgca 8709 Query: 409 ggaagcttgaatattttatcatttttgatgttcgaatatacatgctatatgaataatgat 468 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 8708 ggaagcttgaatattttatcatttttgatgttcgaatatacatgctatatgaataatgat 8649 Query: 469 taaatgagaaagtatatgtacgaagttcttaaaacttggtgtttttagttattgattttg 528 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 8648 taaatgagaaagtatatgtacgaagttcttaaaacttggtgtttttagttattgattttg 8589 Query: 529 cataataagaatcctttcttctcttcaatccacttgtttttattttcttttggattatac 588 |||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| Sbjct: 8588 cataataagaatcctttcttctcttcaatccacttgtttttattttcttttgtattatac 8529 Query: 589 ttttcctcttttctctttcgtatatacacgggatatgatttcgagtcaactacggatcat 648 ||||||||||||||||||||||||||||||| |||||||| ||||||||||||||||| Sbjct: 8528 ttttcctcttttctctttcgtatatacacggtatatgattcgaagtcaactacggatcat 8469 Query: 649 ttagagcataacgagaacgatgtctacttcatctgaagcagtgccaaaatcccgggggta 708 | |||||||||||||||||||||||| ||||||||||||||||||||| |||| |||| Sbjct: 8468 tagaagcataacgagaacgatgtctactccatctgaagcagtgccaaaat-ccggtggta 8410 Query: 709 aattggcagttacccttgaagaccccttaagggtaccaagggacggggctgaaaagggat 768 |||| |||||| ||||||||||||| |||||||||||| |||| |||||||||| |||| Sbjct: 8409 aatt-gcagtttaccttgaagacccc-taagggtaccaa-ggactgggctgaaaa-ggat 8354 Query: 769 tggtttattagagaaggccaattttagtcaattggcggtctttgtttaagaaaaacgggg 828 | |||| |||| |||||| ||||||||||||| | ||||||||| |||| | || || Sbjct: 8353 atggttatcagag-aggccatttttagtcaattgtc-gtctttgttcaagagacac--gg 8298 Query: 829 gggtattacattgga 843 |||||||||||||| Sbjct: 8297 tggtattacattgga 8283 Database: Klactis 3X assemblage 11/02 Posted date: Nov 27, 2002 12:23 PM Number of letters in database: 10,358,551 Number of sequences in database: 1807 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 8591 Number of Sequences: 1807 Number of extensions: 8591 Number of successful extensions: 57 Number of sequences better than 1.0e-20: 1 length of query: 952 length of database: 10,358,551 effective HSP length: 16 effective length of query: 936 effective length of database: 10,329,639 effective search space: 9668542104 effective search space used: 9668542104 T: 0 A: 40 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 50 (99.6 bits)