BLASTN 2.2.3 [May-13-2002] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= FJ0AC29ZH05FM1.SCF screened BAC_end (944 letters) Database: Klactis 3X assemblage 11/02 1807 sequences; 10,358,551 total letters Searching....done Score E Sequences producing significant alignments: (bits) Value 3x_Contig1668 1255 0.0 >3x_Contig1668 Length = 13429 Score = 1255 bits (633), Expect = 0.0 Identities = 804/840 (95%), Gaps = 16/840 (1%) Strand = Plus / Minus Query: 85 cttacactagcggcgacgaaaaaatcgaggtcatcagggattcagtgccaagtgctgttg 144 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 8004 cttacactagcggcgacgaaaaaatcgaggtcatcagggattcagtgccaagtgctgttg 7945 Query: 145 cagctccaggttactccagcacttggtctactgccgcaagtttatctactggaggtaata 204 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 7944 cagctccaggttactccagcacttggtctactgccgcaagtttatctactggaggtaata 7885 Query: 205 tcttcacagttaccaacaatgctaatggtactgtttcgactggtacaggatcttcaggct 264 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 7884 tcttcacagttaccaacaatgctaatggtactgtttcgactggtacaggatcttcaggct 7825 Query: 265 ccggcagttcaacctccggtaattcgggttcaacctcaaccggttcctcttcaaaaaaag 324 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 7824 ccggcagttcaacctccggtaattcgggttcaacctcaaccggttcctcttcaaaaaaag 7765 Query: 325 aaggcgctgcctccagcttgccagtaccacacttggctgcgctaatttgtctacttctaa 384 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 7764 aaggcgctgcctccagcttgccagtaccacacttggctgcgctaatttgtctacttctaa 7705 Query: 385 gtgcagtttccatcccatccttgttctgagctgaggaagactgttacttaataaaagcaa 444 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 7704 gtgcagtttccatcccatccttgttctgagctgaggaagactgttacttaataaaagcaa 7645 Query: 445 aagaaaaaaaaagaaaaatacacacaaacacacacgatgcagacttctatcagaggaact 504 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 7644 aagaaaaaaaaagaaaaatacacacaaacacacacgatgcagacttctatcagaggaact 7585 Query: 505 tcgtttcacatcatctcacatttggtcttactctcttcgtctatttcattgncttaattt 564 ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| Sbjct: 7584 tcgtttcacatcatctcacatttggtcttactctcttcgtctatttcattgtcttaattt 7525 Query: 565 agcacattttcggtttctttgtcagaacaaagattctattgccaatagaaaccctttcac 624 ||||||||||||| |||||||||||| ||||||||||||||||||||||||||||||||| Sbjct: 7524 agcacattttcgg-ttctttgtcagatcaaagattctattgccaatagaaaccctttcac 7466 Query: 625 tgcccaaaaattgatgcgttgctcgatcttcgttccacttgcataggaacaagaaagcct 684 ||||||||||||||||||||||||||||| |||||||||||||||||||| ||||||||| Sbjct: 7465 tgcccaaaaattgatgcgttgctcgatctccgttccacttgcataggaac-agaaagcct 7407 Query: 685 ataatcagaatttcttttaacaccctagttaatttcaatttctcacataagcttactttc 744 |||||||||||||||||||||||||||||||| ||||||||||||||||||| |||| || Sbjct: 7406 ataatcagaatttcttttaacaccctagttaa-ttcaatttctcacataagcatactctc 7348 Query: 745 tatcaaaaattttgttcaaacttacccttcaaactaatttcaacaggtccaggcatttta 804 |||||| ||| |||||| ||||||||| || |||| ||||| ||||||| | |||||||| Sbjct: 7347 tatcaagaatattgttc-aacttaccc-tcgaact-atttcgacaggtcga-gcatttta 7292 Query: 805 tttttgatcaaattgatttccgattaatttngtttggagtgaacaaaaaatccaacccaa 864 | |||||| |||||| |||||| |||||| |||| |||||||| |||||||| | |||| Sbjct: 7291 -tattgatc-aattga-ttccga-taattt-gttt-gagtgaac-aaaaatcccaaccaa 7239 Query: 865 aagacggaaccctttcttaattaaactcaattccgccccttgttcagccaaattttacag 924 |||||| || || |||||||||||||||| || ||||||||| ||||||| ||||||| Sbjct: 7238 gagacgg-acactatcttaattaaactcaa-tcagccccttgtccagccaatatttacag 7181 Database: Klactis 3X assemblage 11/02 Posted date: Nov 27, 2002 12:23 PM Number of letters in database: 10,358,551 Number of sequences in database: 1807 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 8272 Number of Sequences: 1807 Number of extensions: 8272 Number of successful extensions: 134 Number of sequences better than 1.0e-20: 1 length of query: 944 length of database: 10,358,551 effective HSP length: 16 effective length of query: 928 effective length of database: 10,329,639 effective search space: 9585904992 effective search space used: 9585904992 T: 0 A: 40 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 50 (99.6 bits)