BLASTN 2.2.3 [May-13-2002]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= FJ0AC29ZH05RM1.SCF screened BAC_end
         (931 letters)

Database: Klactis 3X assemblage 11/02 
           1807 sequences; 10,358,551 total letters

Searching....done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

3x_Contig1193                                                        1366   0.0  

>3x_Contig1193 
          Length = 4968

 Score = 1366 bits (689), Expect = 0.0
 Identities = 765/784 (97%), Gaps = 5/784 (0%)
 Strand = Plus / Plus

                                                                        
Query: 47   tgaaggaatcaattatcacttcattgtccttgcttcctgcaaatgcattagttggtctaa 106
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2811 tgaaggaatcaattatcacttcattgtccttgcttcctgcaaatgcattagttggtctaa 2870

                                                                        
Query: 107  tcacttacgataatgtgattcaactgcacgacttatcatcagcttctattgataaatgta 166
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2871 tcacttacgataatgtgattcaactgcacgacttatcatcagcttctattgataaatgta 2930

                                                                        
Query: 167  atgtgttcagaggtgatcgtgaataccaattggctcaattagttgaaatgctaaccggtg 226
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2931 atgtgttcagaggtgatcgtgaataccaattggctcaattagttgaaatgctaaccggtg 2990

                                                                        
Query: 227  aaaaattaaatgctgcacaagccgttaatatcaatgctccaaccaaggttacacctttct 286
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2991 aaaaattaaatgctgcacaagccgttaatatcaatgctccaaccaaggttacacctttct 3050

                                                                        
Query: 287  ctttgaacaggttcttcttaccattggaacaagttgaattcaagttgacccaattgttgg 346
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3051 ctttgaacaggttcttcttaccattggaacaagttgaattcaagttgacccaattgttgg 3110

                                                                        
Query: 347  aaaacctgaagcctgatcaatgggatgtgaaatctggtttcagacctttaagagcgactg 406
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3111 aaaacctgaagcctgatcaatgggatgtgaaatctggtttcagacctttaagagcgactg 3170

                                                                        
Query: 407  gttctgctttgaacattgcatcgttggtgttggaaggttgttacaagaacgttgctgcta 466
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3171 gttctgctttgaacattgcatcgttggtgttggaaggttgttacaagaacgttgctgcta 3230

                                                                        
Query: 467  gaataatcttgttctcctccggtcctggcaccgtgggcccaggtcttgtcgtttccccgg 526
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3231 gaataatcttgttctcctccggtcctggcaccgtgggcccaggtcttgtcgtttccccgg 3290

                                                                        
Query: 527  gnttaaaagacccattgagatctcatcacgatattgattctgattctgcaaaacattaca 586
              ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3291 aattaaaagacccattgagatctcatcacgatattgattctgattctgcaaaacattaca 3350

                                                                        
Query: 587  agaaggccttgtaattctacaaccaattggctcaaaaagtcgctgacaatggtcatacag 646
            |||||||||   ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3351 agaaggcctgtaaattctacaaccaattggctcaaaaagtcgctgacaatggtcatacag 3410

                                                                        
Query: 647  tcgatatttttgctgggtgttatgatcaagttggtatgtccgaaatgaagagacttacag 706
            |||||||||||||||| |||||||||||||||||||||||||||||||||||||| ||||
Sbjct: 3411 tcgatatttttgctggttgttatgatcaagttggtatgtccgaaatgaagagactaacag 3470

                                                                        
Query: 707  att-cactggtggtgtcttgttattgactgatgcgttctccaccgttatttttaaac-gt 764
            ||| ||||||||||||||||||||||||||||||||||||||||| | ||||||||| ||
Sbjct: 3471 attccactggtggtgtcttgttattgactgatgcgttctccaccgctttttttaaacagt 3530

                                                                        
Query: 765  catatttaaaaatctttttctagggatgaaagaaggttatttgccaaaggcattcaaggg 824
            ||||| | || ||| ||||||| ||||| ||||||||||||||| || ||||||||||||
Sbjct: 3531 catatct-aagatc-ttttctaaggatg-aagaaggttatttgcaaatggcattcaaggg 3587

                
Query: 825  tacc 828
            ||||
Sbjct: 3588 tacc 3591


  Database: Klactis 3X assemblage 11/02
    Posted date:  Nov 27, 2002 12:23 PM
  Number of letters in database: 10,358,551
  Number of sequences in database:  1807
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 6592
Number of Sequences: 1807
Number of extensions: 6592
Number of successful extensions: 38
Number of sequences better than 1.0e-20: 1
length of query: 931
length of database: 10,358,551
effective HSP length: 16
effective length of query: 915
effective length of database: 10,329,639
effective search space: 9451619685
effective search space used: 9451619685
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 50 (99.6 bits)