BLASTN 2.2.3 [May-13-2002] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= FJ0AC29ZH05RM1.SCF screened BAC_end (931 letters) Database: Klactis 3X assemblage 11/02 1807 sequences; 10,358,551 total letters Searching....done Score E Sequences producing significant alignments: (bits) Value 3x_Contig1193 1366 0.0 >3x_Contig1193 Length = 4968 Score = 1366 bits (689), Expect = 0.0 Identities = 765/784 (97%), Gaps = 5/784 (0%) Strand = Plus / Plus Query: 47 tgaaggaatcaattatcacttcattgtccttgcttcctgcaaatgcattagttggtctaa 106 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 2811 tgaaggaatcaattatcacttcattgtccttgcttcctgcaaatgcattagttggtctaa 2870 Query: 107 tcacttacgataatgtgattcaactgcacgacttatcatcagcttctattgataaatgta 166 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 2871 tcacttacgataatgtgattcaactgcacgacttatcatcagcttctattgataaatgta 2930 Query: 167 atgtgttcagaggtgatcgtgaataccaattggctcaattagttgaaatgctaaccggtg 226 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 2931 atgtgttcagaggtgatcgtgaataccaattggctcaattagttgaaatgctaaccggtg 2990 Query: 227 aaaaattaaatgctgcacaagccgttaatatcaatgctccaaccaaggttacacctttct 286 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 2991 aaaaattaaatgctgcacaagccgttaatatcaatgctccaaccaaggttacacctttct 3050 Query: 287 ctttgaacaggttcttcttaccattggaacaagttgaattcaagttgacccaattgttgg 346 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 3051 ctttgaacaggttcttcttaccattggaacaagttgaattcaagttgacccaattgttgg 3110 Query: 347 aaaacctgaagcctgatcaatgggatgtgaaatctggtttcagacctttaagagcgactg 406 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 3111 aaaacctgaagcctgatcaatgggatgtgaaatctggtttcagacctttaagagcgactg 3170 Query: 407 gttctgctttgaacattgcatcgttggtgttggaaggttgttacaagaacgttgctgcta 466 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 3171 gttctgctttgaacattgcatcgttggtgttggaaggttgttacaagaacgttgctgcta 3230 Query: 467 gaataatcttgttctcctccggtcctggcaccgtgggcccaggtcttgtcgtttccccgg 526 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 3231 gaataatcttgttctcctccggtcctggcaccgtgggcccaggtcttgtcgtttccccgg 3290 Query: 527 gnttaaaagacccattgagatctcatcacgatattgattctgattctgcaaaacattaca 586 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 3291 aattaaaagacccattgagatctcatcacgatattgattctgattctgcaaaacattaca 3350 Query: 587 agaaggccttgtaattctacaaccaattggctcaaaaagtcgctgacaatggtcatacag 646 ||||||||| |||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 3351 agaaggcctgtaaattctacaaccaattggctcaaaaagtcgctgacaatggtcatacag 3410 Query: 647 tcgatatttttgctgggtgttatgatcaagttggtatgtccgaaatgaagagacttacag 706 |||||||||||||||| |||||||||||||||||||||||||||||||||||||| |||| Sbjct: 3411 tcgatatttttgctggttgttatgatcaagttggtatgtccgaaatgaagagactaacag 3470 Query: 707 att-cactggtggtgtcttgttattgactgatgcgttctccaccgttatttttaaac-gt 764 ||| ||||||||||||||||||||||||||||||||||||||||| | ||||||||| || Sbjct: 3471 attccactggtggtgtcttgttattgactgatgcgttctccaccgctttttttaaacagt 3530 Query: 765 catatttaaaaatctttttctagggatgaaagaaggttatttgccaaaggcattcaaggg 824 ||||| | || ||| ||||||| ||||| ||||||||||||||| || |||||||||||| Sbjct: 3531 catatct-aagatc-ttttctaaggatg-aagaaggttatttgcaaatggcattcaaggg 3587 Query: 825 tacc 828 |||| Sbjct: 3588 tacc 3591 Database: Klactis 3X assemblage 11/02 Posted date: Nov 27, 2002 12:23 PM Number of letters in database: 10,358,551 Number of sequences in database: 1807 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 6592 Number of Sequences: 1807 Number of extensions: 6592 Number of successful extensions: 38 Number of sequences better than 1.0e-20: 1 length of query: 931 length of database: 10,358,551 effective HSP length: 16 effective length of query: 915 effective length of database: 10,329,639 effective search space: 9451619685 effective search space used: 9451619685 T: 0 A: 40 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 50 (99.6 bits)